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L1_008_000G1_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_235_1
unknown

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2..172
DNA (171bp) protein (57aa)

This feature has no annotations

L1_008_000G1_scaffold_235_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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169..813
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99856.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L1_008_000G1_scaffold_235_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(876..1289)
DNA (414bp) protein (138aa)
Putative membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENB9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEQ59631.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted membrane protein
L1_008_000G1_scaffold_235_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1793..2719
DNA (927bp) protein (309aa)
Lipid kinase, YegS/Rv2252/BmrU family {ECO:0000313|EMBL:EEQ59635.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEQ59635.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Lipid kinase, YegS/Rv2252/BmrU family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC3_9FIRM
diacylglycerol kinase catalytic subunit
L1_008_000G1_scaffold_235_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2885..3427
DNA (543bp) protein (181aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC4_9FIRM
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
L1_008_000G1_scaffold_235_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3500..4909
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC5_9FIRM
L1_008_000G1_scaffold_235_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4894..5493
DNA (600bp) protein (200aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPC9_9CLOT
ribonuclease III
L1_008_000G1_scaffold_235_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5490..6233
DNA (744bp) protein (248aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC7_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEQ59639.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_235_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6265..7236
DNA (972bp) protein (324aa)
Transglutaminase-like protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC8_9FIRM
Transglutaminase-like protein {ECO:0000313|EMBL:EEQ59640.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transglutaminase domain-containing protein
L1_008_000G1_scaffold_235_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7252..8310
DNA (1059bp) protein (353aa)
Bacterial type II secretion system domain protein F n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC9_9FIRM
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EEQ59641.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
type II secretion system F domain-containing protein
L1_008_000G1_scaffold_235_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8323..8667
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59642.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8664..9158
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59643.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9151..9666
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59644.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9700..10179
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59645.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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10272..11333
DNA (1062bp) protein (354aa)
Twitching motility protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END4_9FIRM
Twitching motility protein {ECO:0000313|EMBL:EEQ59646.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
twitching motility protein
L1_008_000G1_scaffold_235_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11588..12535
DNA (948bp) protein (316aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L-lactate dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END5_9FIRM
L-lactate dehydrogenase
L1_008_000G1_scaffold_235_17
unknown

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12637..12777
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000G1_scaffold_235_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13125..13304
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5END7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59649.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_235_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14070..14621
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59652.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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14626..16260
DNA (1635bp) protein (545aa)
GH3 auxin-responsive promoter n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE1_9FIRM
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EEQ59653.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
GH3 auxin-responsive promoter.
L1_008_000G1_scaffold_235_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16265..18835
DNA (2571bp) protein (857aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE2_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEQ59654.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
diguanylate cyclase and metal dependent phosphohydrolase
L1_008_000G1_scaffold_235_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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19073..19639
DNA (567bp) protein (189aa)
Quaternary ammonium compound-resistance protein n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KXD8_CLOBM
quaternary ammonium compound-resistance protein
Cadmium resistance transporter family protein {ECO:0000313|EMBL:EEQ59907.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_235_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19647..20000)
DNA (354bp) protein (118aa)
Branched-chain amino acid transport protein AzlD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE4_9FIRM
Branched-chain amino acid transport protein AzlD {ECO:0000313|EMBL:EEQ59656.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
azlD; Branched-chain amino acid transport protein AzlD
L1_008_000G1_scaffold_235_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19997..20704)
DNA (708bp) protein (236aa)
Putative azaleucine resistance protein AzlC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE5_9FIRM
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:EEQ59657.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20875..22569
DNA (1695bp) protein (565aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glutamine--tRNA ligase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE6_9FIRM
glutaminyl-tRNA synthetase
L1_008_000G1_scaffold_235_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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22894..24294
DNA (1401bp) protein (467aa)
Putative HTH-type transcriptional regulatory protein GabR n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE7_9FIRM
Putative HTH-type transcriptional regulatory protein GabR {ECO:0000313|EMBL:EEQ59659.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DeoR family transcriptional regulator
L1_008_000G1_scaffold_235_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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24322..25215
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59660.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25362..26018)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59661.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_235_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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26297..26581
DNA (285bp) protein (95aa)
10 kDa chaperonin n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENF0_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Co-chaperonin GroES (HSP10)
L1_008_000G1_scaffold_235_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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26635..28257
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EN67_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
chaperonin GroEL
Displaying items 1-30 of 79 in total

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