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L1_008_000G1_scaffold_405

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_405_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..109
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5T5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53304.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L1_008_000G1_scaffold_405_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149..967)
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU5_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61089.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
lactose ABC transporter permease
L1_008_000G1_scaffold_405_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(970..1860)
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU6_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61090.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_405_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1970..3334)
DNA (1365bp) protein (455aa)
Lactose-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU7_9FIRM
Lactose-binding protein {ECO:0000313|EMBL:EEQ61091.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_405_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3355..5574)
DNA (2220bp) protein (740aa)
Beta-galactosidase {ECO:0000313|EMBL:EEQ61092.1}; EC=3.2.1.23 {ECO:0000313|EMBL:EEQ61092.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Beta-galactosidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU8_9FIRM
beta-galactosidase
L1_008_000G1_scaffold_405_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5552..6502)
DNA (951bp) protein (317aa)
Putative membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESU9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EEQ61093.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_405_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6564..7211)
DNA (648bp) protein (216aa)
4Fe-4S binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV0_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEQ61094.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
4Fe-4S ferredoxin
L1_008_000G1_scaffold_405_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7213..9684)
DNA (2472bp) protein (824aa)
Molybdopterin dinucleotide binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV1_9FIRM
Molybdopterin dinucleotide binding domain protein {ECO:0000313|EMBL:EEQ61095.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
dimethyl sulfoxide reductase subunit A
L1_008_000G1_scaffold_405_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10182..11465
DNA (1284bp) protein (428aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV3_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEQ61097.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AraC family transcriptional regulator
L1_008_000G1_scaffold_405_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11605..12630
DNA (1026bp) protein (342aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EEQ61099.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EEQ61099.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV5_9FIRM
L1_008_000G1_scaffold_405_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12742..13167
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61100.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_405_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13284..14000
DNA (717bp) protein (239aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV7_9FIRM
L1_008_000G1_scaffold_405_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13997..14869
DNA (873bp) protein (291aa)
PP-loop family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV8_9FIRM
PP-loop family protein {ECO:0000313|EMBL:EEQ61102.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L1_008_000G1_scaffold_405_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14942..16552
DNA (1611bp) protein (537aa)
LysM domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESV9_9FIRM
LysM domain protein {ECO:0000313|EMBL:EEQ61103.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
peptidoglycan-binding lysin domain-containing protein
L1_008_000G1_scaffold_405_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16724..17635
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61105.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_405_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17632..18888
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61106.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_405_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18941..19723
DNA (783bp) protein (261aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW3_9FIRM
L1_008_000G1_scaffold_405_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19720..20730
DNA (1011bp) protein (337aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW4_9FIRM
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEQ61108.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L1_008_000G1_scaffold_405_19
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20754..20948
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ70080.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_008_000G1_scaffold_405_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21110..21397
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW6_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SSU ribosomal protein S6P
L1_008_000G1_scaffold_405_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21518..21904
DNA (387bp) protein (129aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESW7_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
single-strand binding protein
L1_008_000G1_scaffold_405_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21943..22212
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=18 Tax=Clostridiales RepID=A8RXV2_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
SSU ribosomal protein S18P
L1_008_000G1_scaffold_405_23
unknown

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22243..22359
DNA (117bp) protein (39aa)

This feature has no annotations

L1_008_000G1_scaffold_405_24
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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22629..23630
DNA (1002bp) protein (334aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYQ5_9FIRM
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCO07915.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
LacI family transcriptional regulator
L1_008_000G1_scaffold_405_25
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23705..24814
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Bacillus fordii RepID=UPI000379D104
Contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU04013.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
aminopeptidase
L1_008_000G1_scaffold_405_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24860..25873
DNA (1014bp) protein (338aa)
Sugar-binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8T4_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EDS12330.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
periplasmic binding protein/LacI transcriptional regulator
L1_008_000G1_scaffold_405_27
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25948..26346
DNA (399bp) protein (133aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3C26.;"
ribose pyranase n=1 Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B39ECA
D-ribose pyranase
L1_008_000G1_scaffold_405_28
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26368..27858
DNA (1491bp) protein (497aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9MSD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS73678.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
MglA4; ABC-type sugar (aldose) transport system, ATPase component
L1_008_000G1_scaffold_405_29
Bacillus simplex, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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27860..28804
DNA (945bp) protein (315aa)
ribose ABC transporter permease n=1 Tax=Paenibacillus elgii RepID=UPI000248CAA4
Ribose ABC transporter permease {ECO:0000313|EMBL:CEG34867.1}; TaxID=1478 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus simplex.;"
rbsC_2; ribose transport system permease protein rbsC
L1_008_000G1_scaffold_405_30
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

28859..30133
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00030D7BC7
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
Tax=CG_Anaero_02
Displaying items 1-30 of 54 in total

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