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L1_008_000G1_scaffold_552

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_552_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60029.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_552_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(130..804)
DNA (675bp) protein (225aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPE8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ60028.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC-type multidrug transport system, ATPase component
L1_008_000G1_scaffold_552_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(920..1828)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60027.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
YjlA like protein
L1_008_000G1_scaffold_552_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1960..2766
DNA (807bp) protein (269aa)
N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPE6_9FIRM
N-acetylmuramoyl-L-alanine amidase domain protein {ECO:0000313|EMBL:EEQ60026.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cysteine-rich secretory protein family./Putative cell wall binding repeat.
L1_008_000G1_scaffold_552_5
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2854..3210)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQS7_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
LSU ribosomal protein L20P
L1_008_000G1_scaffold_552_6
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3238..3435)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=6 Tax=Clostridiales RepID=D3AS17_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
LSU ribosomal protein L35P
L1_008_000G1_scaffold_552_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3465..3959)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPE3_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
translation initiation factor IF-3
L1_008_000G1_scaffold_552_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4364..4678)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59966.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_552_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4739..6355)
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59965.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cellulase (glycosyl hydrolase family 5).
L1_008_000G1_scaffold_552_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6352..7779)
DNA (1428bp) protein (476aa)
MATE efflux family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP84_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEQ59964.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
MATE efflux family protein
L1_008_000G1_scaffold_552_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7776..8414)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59963.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_552_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8368..9192)
DNA (825bp) protein (275aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP82_9FIRM
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EEQ59962.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L1_008_000G1_scaffold_552_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9632..10663)
DNA (1032bp) protein (344aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP81_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EEQ59961.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_552_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10660..11601)
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP80_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEQ59960.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
regulatory protein, LysR
L1_008_000G1_scaffold_552_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11617..12780)
DNA (1164bp) protein (388aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP79_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ59959.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
modC; molybdate ABC transporter ATP-binding protein ModC
L1_008_000G1_scaffold_552_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12784..13455)
DNA (672bp) protein (224aa)
Molybdate ABC transporter, permease n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQU2_9CLOT
Molybdate ABC transporter, permease {ECO:0000313|EMBL:EHE96080.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
molybdate ABC transporter, permease component, ModC
L1_008_000G1_scaffold_552_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13478..14416)
DNA (939bp) protein (313aa)
Molybdate ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP78_9FIRM
Molybdate ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EEQ59958.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
modA; molybdate ABC transporter substrate-binding protein
L1_008_000G1_scaffold_552_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14631..15641)
DNA (1011bp) protein (337aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP77_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EEQ59957.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
molybdenum cofactor synthesis domain-containing protein
L1_008_000G1_scaffold_552_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15652..16713)
DNA (1062bp) protein (354aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP76_9FIRM
hypothetical protein
L1_008_000G1_scaffold_552_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16731..17210)
DNA (480bp) protein (160aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP75_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
molybdenum cofactor biosynthesis protein C
L1_008_000G1_scaffold_552_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17225..18283)
DNA (1059bp) protein (353aa)
Molybdopterin binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EP74_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:EEQ59954.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
molybdopterin binding domain-containing protein
L1_008_000G1_scaffold_552_22
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18435..18608
DNA (174bp) protein (58aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4I8_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG53731.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L1_008_000G1_scaffold_552_23
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18709..19029
DNA (321bp) protein (107aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D4I8_9CLOT
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEG53731.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L1_008_000G1_scaffold_552_24
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19622..20539)
DNA (918bp) protein (306aa)
Predicted transcriptional regulator, LysR family n=2 Tax=Clostridium RepID=D8GSD4_CLOLD
transcriptional regulator, LysR family
Predicted transcriptional regulator, LysR family {ECO:0000313|EMBL:ADK16516.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L1_008_000G1_scaffold_552_25
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20719..21738
DNA (1020bp) protein (340aa)
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
2-hydroxyacid dehydrogenase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7IB19_9CLOT
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:ETA82539.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
L1_008_000G1_scaffold_552_26
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21788..22474
DNA (687bp) protein (229aa)
Dimethylmenaquinone methyltransferase n=2 Tax=Clostridium RepID=U5RVM6_9CLOT
demethylmenaquinone methyltransferase
Putative demethylmenaquinone methyltransferase {ECO:0000313|EMBL:ADK16518.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
L1_008_000G1_scaffold_552_27
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22497..23777
DNA (1281bp) protein (427aa)
Citrate transporter family protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6THI6_9FIRM
Citrate transporter family protein {ECO:0000313|EMBL:CDC71705.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
citrate transporter family protein
L1_008_000G1_scaffold_552_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24193..25008
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KRE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64712.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L1_008_000G1_scaffold_552_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25040..25285)
DNA (246bp) protein (82aa)
Acetyltransferase n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZTQ9_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENZ43245.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
acetyltransferase
L1_008_000G1_scaffold_552_30
unknown

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comp(26166..26672)
DNA (507bp) protein (169aa)

This feature has no annotations

Displaying items 1-30 of 44 in total

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