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L1_008_000G1_scaffold_630

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_630_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(91..1845)
DNA (1755bp) protein (585aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HS78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95609.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000G1_scaffold_630_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1919..2344)
DNA (426bp) protein (142aa)
MarR family transcriptional regulator n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YS53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13511.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Transcriptional regulators
L1_008_000G1_scaffold_630_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2589..3308
DNA (720bp) protein (240aa)
AzlC protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQM3_9FIRM
AzlC protein {ECO:0000313|EMBL:EEQ60317.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
AzlC family protein
L1_008_000G1_scaffold_630_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3298..3606
DNA (309bp) protein (103aa)
Branched-chain amino acid transport protein (AzlD) n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQM2_9FIRM
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EEQ60316.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
branched-chain amino acid transporter
L1_008_000G1_scaffold_630_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3668..4966)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60315.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Protein of unknown function (DUF1576).
L1_008_000G1_scaffold_630_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5036..5401)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60314.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_630_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5500..7443)
DNA (1944bp) protein (648aa)
Oligopeptide transporter, OPT family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL9_9FIRM
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EEQ60313.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_630_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7642..8640)
DNA (999bp) protein (333aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL8_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EEQ60312.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted dehydrogenases and related proteins
L1_008_000G1_scaffold_630_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8671..9564)
DNA (894bp) protein (298aa)
Cell wall-binding repeat protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL7_9FIRM
Cell wall-binding repeat protein {ECO:0000313|EMBL:EEQ60311.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Putative cell wall binding repeat.
L1_008_000G1_scaffold_630_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9744..9950)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60308.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_630_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10028..12046)
DNA (2019bp) protein (673aa)
Molybdopterin oxidoreductase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL3_9FIRM
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EEQ60307.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
molybdopterin oxidoreductase
L1_008_000G1_scaffold_630_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12171..13298)
DNA (1128bp) protein (376aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL2_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEQ60306.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cation diffusion facilitator family transporter
L1_008_000G1_scaffold_630_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13650..14636)
DNA (987bp) protein (329aa)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EEQ60305.1}; EC=1.4.1.16 {ECO:0000313|EMBL:EEQ60305.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL1_9FIRM
L1_008_000G1_scaffold_630_14
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14696..14980)
DNA (285bp) protein (95aa)
wecD; acetyltransferase (EC:2.3.1.-)
Acetyltransferase GNAT family n=1 Tax=Veillonella sp. CAG:933 RepID=R5BLZ7_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCX55189.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L1_008_000G1_scaffold_630_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15215..16156)
DNA (942bp) protein (314aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQL0_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_630_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16257..17348)
DNA (1092bp) protein (364aa)
Putative agmatine deiminase {ECO:0000256|HAMAP-Rule:MF_01841}; EC=3.5.3.12 {ECO:0000256|HAMAP-Rule:MF_01841};; Agmatine iminohydrolase {ECO:0000256|HAMAP-Rule:MF_01841}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
agmatine deiminase (EC:3.5.3.12)
Putative agmatine deiminase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK9_9FIRM
L1_008_000G1_scaffold_630_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17368..18780)
DNA (1413bp) protein (471aa)
Amino acid permease n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK8_9FIRM
Amino acid permease {ECO:0000313|EMBL:EEQ60302.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
amino acid permease
L1_008_000G1_scaffold_630_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18806..19822)
DNA (1017bp) protein (339aa)
Putrescine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_02102}; Short=PTC {ECO:0000256|HAMAP-Rule:MF_02102};; Short=PTCase {ECO:0000256|HAMAP-Rule:MF_02102};; EC=2.1.3.6 {ECO:0000256|HAMAP-Rule:MF_02102};; Putrescine transcarbamoylase {ECO:0000256|HAMAP-Rule:MF_02102}; Putrescine transcarbamylase {ECO:0000256|HAMAP-Rule:MF_02102}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ornithine carbamoyltransferase (EC:2.1.3.3)
Putrescine carbamoyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK7_9FIRM
L1_008_000G1_scaffold_630_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20193..21293
DNA (1101bp) protein (367aa)
Transcriptional regulator, LuxR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK6_9FIRM
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEQ60300.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
LuxR family transcriptional regulator
L1_008_000G1_scaffold_630_20
unknown

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comp(21269..21484)
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_000G1_scaffold_630_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21442..22620)
DNA (1179bp) protein (393aa)
LysM domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK4_9FIRM
LysM domain protein {ECO:0000313|EMBL:EEQ60298.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
glycoside hydrolase
L1_008_000G1_scaffold_630_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22733..24088)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEQ60297.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
mate efflux family protein
L1_008_000G1_scaffold_630_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24078..24527)
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK2_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEQ60296.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
MarR family transcriptional regulator
L1_008_000G1_scaffold_630_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24768..25565
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60295.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_630_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25572..25832)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60294.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_630_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25955..26863)
DNA (909bp) protein (303aa)
Phenazine biosynthesis protein, PhzF family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ5_9FIRM
Phenazine biosynthesis protein, PhzF family {ECO:0000313|EMBL:EEQ60289.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phenazine biosynthesis protein PhzF family
L1_008_000G1_scaffold_630_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27001..28401)
DNA (1401bp) protein (467aa)
Putative RNA polymerase sigma-54 factor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ4_9FIRM
Putative RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EEQ60288.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
RNA polymerase sigma-54 subunit RpoN
L1_008_000G1_scaffold_630_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28568..30493)
DNA (1926bp) protein (642aa)
NADH oxidase {ECO:0000313|EMBL:EEQ60287.1}; EC=1.-.-.- {ECO:0000313|EMBL:EEQ60287.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
NADH oxidase (EC:1.-.-.-)
NADH oxidase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ3_9FIRM
L1_008_000G1_scaffold_630_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30515..31522)
DNA (1008bp) protein (336aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ2_9FIRM
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:EEQ60286.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Electron transfer flavoprotein subunit alpha
L1_008_000G1_scaffold_630_30
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31537..32340)
DNA (804bp) protein (268aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQJ1_9FIRM
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EEQ60285.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
electron transfer flavoprotein subunit alpha/beta
Displaying items 1-30 of 35 in total

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