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L1_008_000G1_scaffold_883

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000G1_scaffold_883_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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113..1018
DNA (906bp) protein (302aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Hydroxymethylbilane synthase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV71_9FIRM
porphobilinogen deaminase
L1_008_000G1_scaffold_883_2
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1020..2558
DNA (1539bp) protein (513aa)
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EEQ61914.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EEQ61914.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
uroporphyrin-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV70_9FIRM
L1_008_000G1_scaffold_883_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2681..4120
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61912.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_883_4
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4204..5583
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61911.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_883_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5583..6386
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61910.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_883_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6331..9738
DNA (3408bp) protein (1136aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61909.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
SMC domain-containing protein
L1_008_000G1_scaffold_883_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9834..11192
DNA (1359bp) protein (453aa)
Citrate synthase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV64_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Citrate synthase
L1_008_000G1_scaffold_883_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11290..11667
DNA (378bp) protein (126aa)
Putative toxin-antitoxin system, antitoxin component, Xre family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV63_9FIRM
Putative toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EEQ61907.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_883_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11847..12593
DNA (747bp) protein (249aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV61_9FIRM
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:EEQ61905.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
5-formyltetrahydrofolate cyclo-ligase
L1_008_000G1_scaffold_883_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12608..14140
DNA (1533bp) protein (511aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV60_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEQ61904.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter-like protein
L1_008_000G1_scaffold_883_11
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14127..15200
DNA (1074bp) protein (358aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV59_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61903.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L1_008_000G1_scaffold_883_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15197..16138
DNA (942bp) protein (314aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV58_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEQ61902.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
inner-membrane translocator
L1_008_000G1_scaffold_883_13
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16178..17257
DNA (1080bp) protein (360aa)
Basic membrane protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV57_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EEQ61901.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
basic membrane lipoprotein
L1_008_000G1_scaffold_883_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17448..18311
DNA (864bp) protein (288aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV55_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEQ61899.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted transcriptional regulators
L1_008_000G1_scaffold_883_15
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18392..18736
DNA (345bp) protein (115aa)
Helix-turn-helix protein, YlxM/p13 family n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV54_9FIRM
UPF0122 protein CBFG_05610 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
helix-turn-helix protein YlxM/p13 family protein
L1_008_000G1_scaffold_883_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18769..20145
DNA (1377bp) protein (459aa)
Signal recognition particle protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV53_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
signal recognition particle protein
L1_008_000G1_scaffold_883_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20285..20527
DNA (243bp) protein (81aa)
30S ribosomal protein S16 n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV52_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
30S ribosomal protein S16
L1_008_000G1_scaffold_883_18
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20548..20775
DNA (228bp) protein (76aa)
UPF0109 protein HMPREF9469_03693 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM81_9CLOT
UPF0109 protein HMPREF9469_03693 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
RNA-binding protein (KH domain)
L1_008_000G1_scaffold_883_19
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20880..21392
DNA (513bp) protein (171aa)
Ribosome maturation factor RimM n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV50_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
rimM; 16S rRNA-processing protein RimM
L1_008_000G1_scaffold_883_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21487..22143
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61893.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L1_008_000G1_scaffold_883_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22220..24475
DNA (2256bp) protein (752aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV48_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA mismatch repair protein MutL
L1_008_000G1_scaffold_883_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24525..25484
DNA (960bp) protein (320aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV47_9FIRM
L1_008_000G1_scaffold_883_23
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25877..27172
DNA (1296bp) protein (432aa)
Aluminum resistance protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV46_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:EEQ61890.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
L1_008_000G1_scaffold_883_24
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27265..27516
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ61889.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L1_008_000G1_scaffold_883_25
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27570..28265
DNA (696bp) protein (232aa)
DNA repair protein RadC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV44_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EEQ61888.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA repair protein RadC
L1_008_000G1_scaffold_883_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28280..29125
DNA (846bp) protein (282aa)
Cell shape-determining protein MreC n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV43_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
rod shape-determining protein MreC
L1_008_000G1_scaffold_883_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29122..29655
DNA (534bp) protein (178aa)
Rod shape-determining protein MreD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EV42_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:EEQ61886.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
rod shape-determining protein MreD
L1_008_000G1_scaffold_883_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29648..29836
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HM72_9CLOT
Stage V sporulation protein D {ECO:0000313|EMBL:KJJ72954.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
penicillin-binding protein transpeptidase
Displaying 28 items

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