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L1_008_000M1_scaffold_14831

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_14831_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..122)
DNA (120bp) protein (40aa)
Putative conjugative transposon protein Tn916-like, CTn1-Orf3 n=1 Tax=Clostridium difficile E10 RepID=U3VD69_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD22631.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L1_008_000M1_scaffold_14831_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(124..687)
DNA (564bp) protein (188aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAQ4_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEV01072.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
DNA-directed RNA polymerase specialized sigma subunit
L1_008_000M1_scaffold_14831_3
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1293..1484)
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=C0BCA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88710.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L1_008_000M1_scaffold_14831_4
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1481..1597)
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AW58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27298.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
L1_008_000M1_scaffold_14831_5
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1615..2268)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C0BCB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88712.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L1_008_000M1_scaffold_14831_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2268..3116)
DNA (849bp) protein (283aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GAQ9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV01077.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_14831_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3119..3490)
DNA (372bp) protein (124aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridiales RepID=C7GAR0_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEV01078.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_14831_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3612..3986)
DNA (375bp) protein (125aa)
Conjugative transposon TcpC family protein n=1 Tax=Clostridium difficile P38 RepID=T4Q0N4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEG88717.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
Displaying 8 items

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