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L1_008_000M1_scaffold_3004

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Displaying items 31-43 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3004_31
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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37502..38395
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76523.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_3004_32
unknown

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comp(38266..38748)
DNA (483bp) protein (161aa)

This feature has no annotations

L1_008_000M1_scaffold_3004_33
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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38899..39894
DNA (996bp) protein (332aa)
PhoH family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM0_9FIRM
PhoH family protein {ECO:0000313|EMBL:EFB76528.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L1_008_000M1_scaffold_3004_34
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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39994..40494
DNA (501bp) protein (167aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Endoribonuclease YbeY n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM1_9FIRM
conserved hypothetical protein TIGR00043
L1_008_000M1_scaffold_3004_35
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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40502..41032
DNA (531bp) protein (177aa)
dgkA; Diacylglycerol kinase (EC:2.7.1.107)
Putative undecaprenol kinase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM2_9FIRM
Putative undecaprenol kinase {ECO:0000313|EMBL:EFB76530.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_008_000M1_scaffold_3004_36
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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41120..42037
DNA (918bp) protein (306aa)
GTPase Era n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM3_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
era; GTPase Era
L1_008_000M1_scaffold_3004_37
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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42275..43018
DNA (744bp) protein (248aa)
DNA repair protein RecO n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM4_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DNA replication and repair protein RecO
L1_008_000M1_scaffold_3004_38
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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43092..45467
DNA (2376bp) protein (792aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Endonuclease MutS2 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM5_9FIRM
MutS2 family protein
L1_008_000M1_scaffold_3004_39

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45790..46689
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TDY9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC71387.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_3004_40
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(46803..47378)
DNA (576bp) protein (192aa)
Putative dihydroxyacetone kinase regulator n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KI35_9FIRM
putative dihydroxyacetone kinase regulator
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:AGL00180.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
L1_008_000M1_scaffold_3004_41
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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47424..48800
DNA (1377bp) protein (459aa)
SpoIVB peptidase {ECO:0000313|EMBL:EFB76799.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFB76799.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLE1_9FIRM
L1_008_000M1_scaffold_3004_42
unknown

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48915..49139
DNA (225bp) protein (75aa)

This feature has no annotations

L1_008_000M1_scaffold_3004_43

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49118..49879
DNA (762bp) protein (254aa)
Sporulation transcriptional activator Spo0A n=1 Tax=human gut metagenome RepID=K1T3N8_9ZZZZ
Sporulation transcriptional activator Spo0A {ECO:0000313|EMBL:EKC60815.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Displaying items 31-43 of 43 in total

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