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L1_008_000M1_scaffold_3624

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3624_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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279..1244
DNA (966bp) protein (322aa)
Lipid kinase, YegS/Rv2252/BmrU family n=2 Tax=Clostridiales RepID=U2DA77_9FIRM
conserved protein of unknown function cotranscribed with Bmr (bmrU)
Uncharacterized protein {ECO:0000313|EMBL:CBL21136.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_3624_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1338..3455
DNA (2118bp) protein (706aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DFA1E4
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:ERI93224.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_008_000M1_scaffold_3624_3
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3617..4534
DNA (918bp) protein (306aa)
MoxR-like ATPases n=2 Tax=Clostridiales RepID=D4LMS8_9FIRM
MoxR-like ATPases
MoxR-like ATPases {ECO:0000313|EMBL:CBL21139.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_3624_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4527..6326
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97217.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Nitric oxide reductase activation protein
L1_008_000M1_scaffold_3624_5
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6545..8443
DNA (1899bp) protein (633aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMT1_9FIRM
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:CBL21142.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
putative oligopeptide transporter, OPT family
L1_008_000M1_scaffold_3624_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8443..8817
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98808.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Coenzyme PQQ synthesis protein D (PqqD).
L1_008_000M1_scaffold_3624_7
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8928..9797
DNA (870bp) protein (290aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMT3_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL21144.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_3624_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9934..10914
DNA (981bp) protein (327aa)
Transcriptional regulator, CdaR family n=3 Tax=Clostridiales RepID=D4LMT4_9FIRM
transcriptional regulator, CdaR family
Uncharacterized protein {ECO:0000313|EMBL:ERI93230.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_008_000M1_scaffold_3624_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11220..11903
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHG9_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCY96796.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cell division ATP-binding protein FtsE
L1_008_000M1_scaffold_3624_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11893..12798
DNA (906bp) protein (302aa)
Cell division protein FtsX n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYF4_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cell division protein FtsX
L1_008_000M1_scaffold_3624_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12965..14152
DNA (1188bp) protein (396aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
C-terminal peptidase (Prc) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4C4_9FIRM
C-terminal peptidase (Prc) {ECO:0000313|EMBL:CCY96794.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_3624_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14178..15101
DNA (924bp) protein (308aa)
Predicted permeases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ88_9FIRM
Predicted permeases {ECO:0000313|EMBL:CCY96793.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted permeases
L1_008_000M1_scaffold_3624_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15266..15913
DNA (648bp) protein (216aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NI56_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY96792.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_3624_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16185..16886
DNA (702bp) protein (234aa)
PAP2 superfamily n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHG5_9FIRM
PAP2 superfamily {ECO:0000313|EMBL:CCY96791.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
PAP2 superfamily.
L1_008_000M1_scaffold_3624_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16883..17899
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96790.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_3624_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17926..18609
DNA (684bp) protein (228aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4B9_9FIRM
Phosphatidylserine synthase {ECO:0000313|EMBL:CCY96789.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_3624_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18606..19472
DNA (867bp) protein (289aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ81_9FIRM
L1_008_000M1_scaffold_3624_18
unknown

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19526..19657
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000M1_scaffold_3624_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19722..20402
DNA (681bp) protein (227aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=3 Tax=Clostridiales RepID=D4LMU5_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDE32843.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
L1_008_000M1_scaffold_3624_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20399..20785
DNA (387bp) protein (129aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHF9_9FIRM
Signal transduction histidine kinase
L1_008_000M1_scaffold_3624_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20836..21894
DNA (1059bp) protein (353aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHF9_9FIRM
Signal transduction histidine kinase
L1_008_000M1_scaffold_3624_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22041..22673
DNA (633bp) protein (211aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYE6_9FIRM
L1_008_000M1_scaffold_3624_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22676..23434
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4B5_9FIRM
L1_008_000M1_scaffold_3624_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23456..24130
DNA (675bp) protein (225aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ77_9FIRM
L1_008_000M1_scaffold_3624_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24146..25771
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NI49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96782.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_008_000M1_scaffold_3624_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25935..27365)
DNA (1431bp) protein (477aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHF5_9FIRM
L1_008_000M1_scaffold_3624_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27394..28599
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96780.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
uracil-xanthine permease
L1_008_000M1_scaffold_3624_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28775..29827
DNA (1053bp) protein (351aa)
Protein RecA n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4B1_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
protein RecA
L1_008_000M1_scaffold_3624_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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29831..30319
DNA (489bp) protein (163aa)
Regulatory protein RecX n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ71_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_3624_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30452..30964
DNA (513bp) protein (171aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Ribonuclease Y n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NI45_9FIRM
metal dependent phosphohydrolase
Displaying items 1-30 of 43 in total

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