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L1_008_000M1_scaffold_1016

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1016_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(750..983)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6W4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97624.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1073..3433)
DNA (2361bp) protein (787aa)
Coenzyme F420-reducing hydrogenase beta subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1J9_9FIRM
Coenzyme F420-reducing hydrogenase beta subunit {ECO:0000313|EMBL:CCY97623.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Coenzyme F420-reducing hydrogenase, beta subunit
L1_008_000M1_scaffold_1016_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3430..5250)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97622.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosyltransferases
L1_008_000M1_scaffold_1016_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5243..6898)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97621.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glycosyltransferase
L1_008_000M1_scaffold_1016_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6888..7898)
DNA (1011bp) protein (337aa)
Glycosyl transferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0T4_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:CCY97620.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glycosyltransferase family 2 candidate b-glycosyltransferase
L1_008_000M1_scaffold_1016_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7905..9275)
DNA (1371bp) protein (457aa)
DNA repair protein radA n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6W0_9FIRM
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA repair protein RadA
L1_008_000M1_scaffold_1016_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9269..9682)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97618.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9804..12266)
DNA (2463bp) protein (821aa)
ATPases with chaperone activity ATP-binding subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKK3_9FIRM
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CCY97617.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ATPases with chaperone activity, ATP-binding subunit
L1_008_000M1_scaffold_1016_9
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12278..12655)
DNA (378bp) protein (126aa)
Transcriptional regulator GntR family n=2 Tax=environmental samples RepID=R5NJX6_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDE31305.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
transcriptional regulator, GntR family
L1_008_000M1_scaffold_1016_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12729..13502)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97615.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13690..14964)
DNA (1275bp) protein (425aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6V6_9FIRM
L1_008_000M1_scaffold_1016_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14997..15620)
DNA (624bp) protein (208aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1J2_9FIRM
L1_008_000M1_scaffold_1016_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15614..16639)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKJ8_9FIRM
L1_008_000M1_scaffold_1016_14
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16687..17151)
DNA (465bp) protein (155aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=4 Tax=Clostridiales RepID=D4LJM7_9FIRM
L1_008_000M1_scaffold_1016_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17285..19342)
DNA (2058bp) protein (686aa)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0S7_9FIRM
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:CCY97610.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Leucyl aminopeptidase (aminopeptidase T)
L1_008_000M1_scaffold_1016_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19347..19958)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97609.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19962..20276)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97608.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20276..20734)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97607.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
VanZ family protein
L1_008_000M1_scaffold_1016_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20812..21069)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97606.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21038..21712)
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0S3_9FIRM
L1_008_000M1_scaffold_1016_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21858..22763)
DNA (906bp) protein (302aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6U9_9FIRM
L1_008_000M1_scaffold_1016_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22760..23554)
DNA (795bp) protein (265aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1I5_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L1_008_000M1_scaffold_1016_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23570..24496)
DNA (927bp) protein (309aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKJ0_9FIRM
L1_008_000M1_scaffold_1016_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24499..25791)
DNA (1293bp) protein (431aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJW3_9FIRM
L1_008_000M1_scaffold_1016_25
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26117..26317
DNA (201bp) protein (67aa)
Cold-shock DNA-binding protein family n=4 Tax=Clostridiales RepID=D4LJL6_9FIRM
cold-shock DNA-binding protein family
Cold shock protein CspA {ECO:0000313|EMBL:ERI97593.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_008_000M1_scaffold_1016_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26535..26789)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6U6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97599.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26922..27761)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1I1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97598.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
EDD domain protein, DegV family
L1_008_000M1_scaffold_1016_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27919..28422
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97597.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1016_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28423..28755)
DNA (333bp) protein (111aa)
Sporulation initiation factor Spo0A domain protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJW0_9FIRM
Sporulation initiation factor Spo0A domain protein {ECO:0000313|EMBL:CCY97596.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Sporulation initiation factor Spo0A C terminal.
L1_008_000M1_scaffold_1016_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29050..30048)
DNA (999bp) protein (333aa)
wcwK; Capsular polysaccharide phosphotransferase WcwK (EC:2.7.-.-)
Capsular polysaccharide phosphotransferase wcwK n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0R5_9FIRM
Capsular polysaccharide phosphotransferase wcwK {ECO:0000313|EMBL:CCY97595.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Displaying items 1-30 of 125 in total

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