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L1_008_000M1_scaffold_1028

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1028_1
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..1480)
DNA (1380bp) protein (460aa)
Aldehyde dehydrogenase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSW0_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
aldehyde dehydrogenase
L1_008_000M1_scaffold_1028_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1437..2684)
DNA (1248bp) protein (416aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Dorea longicatena CAG:42 RepID=R7FSA9_9FIRM
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDE17710.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
alcohol dehydrogenase
L1_008_000M1_scaffold_1028_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2932..3765
DNA (834bp) protein (278aa)
Transcriptional regulator, MerR family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKV9_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDM61679.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
MerR family transcriptional regulator
L1_008_000M1_scaffold_1028_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3828..4136)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61678.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_1028_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4322..4912)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BKV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17707.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
cytidylate kinase
L1_008_000M1_scaffold_1028_6
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4946..5638)
DNA (693bp) protein (231aa)
Putative TIGR00659 family protein n=2 Tax=Dorea RepID=A6BKV6_9FIRM
Putative TIGR00659 family protein {ECO:0000313|EMBL:EDM61676.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
LrgB family protein
L1_008_000M1_scaffold_1028_7
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5631..5990)
DNA (360bp) protein (120aa)
LrgA family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKV5_9FIRM
LrgA family protein {ECO:0000313|EMBL:EDM61675.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative effector of murein hydrolase LrgA
L1_008_000M1_scaffold_1028_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6284..7036
DNA (753bp) protein (251aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKV4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM61674.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_1028_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7002..8594
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM61673.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
CARDB.
L1_008_000M1_scaffold_1028_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8557..9984
DNA (1428bp) protein (476aa)
Efflux ABC transporter, permease protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKV2_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDM61672.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_1028_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10060..10323)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZ12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19906.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_1028_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10590..11654
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62368.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted membrane protein, putative toxin regulator
L1_008_000M1_scaffold_1028_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11868..12392
DNA (525bp) protein (175aa)
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase n=2 Tax=Dorea RepID=A6BIM3_9FIRM
Putative cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:EDM62369.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
ATP:corrinoid adenosyltransferase BtuR/CobO/CobP
L1_008_000M1_scaffold_1028_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12571..13281
DNA (711bp) protein (237aa)
RelA/SpoT domain protein n=2 Tax=Dorea RepID=A6BIM4_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:CDE19950.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_1028_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13451..14110
DNA (660bp) protein (220aa)
PHP domain protein {ECO:0000313|EMBL:EDM62371.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDM62371.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
PHP domain protein n=2 Tax=Dorea RepID=A6BIM5_9FIRM
Predicted metal-dependent phosphoesterases (PHP family)
L1_008_000M1_scaffold_1028_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14237..14842
DNA (606bp) protein (202aa)
Selenium metabolism protein YedF n=2 Tax=Dorea RepID=A6BIM6_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:CDE19953.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
selenium metabolism protein YedF
L1_008_000M1_scaffold_1028_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15172..16050
DNA (879bp) protein (293aa)
selenium donor protein (EC:2.7.9.3)
Selenide water dikinase n=2 Tax=Dorea RepID=R7FYF5_9FIRM
Selenide water dikinase {ECO:0000313|EMBL:CDE19955.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_1028_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16090..17502
DNA (1413bp) protein (471aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
selA; L-seryl-tRNA(Sec) selenium transferase SelA (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Dorea RepID=A6BIM8_9FIRM
L1_008_000M1_scaffold_1028_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17518..19431
DNA (1914bp) protein (638aa)
Selenocysteine-specific translation elongation factor n=2 Tax=Dorea RepID=A6BIM9_9FIRM
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EDM62375.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
selB; selenocysteine-specific elongation factor SelB
L1_008_000M1_scaffold_1028_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19431..20339
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=2 Tax=Dorea RepID=A6BIN0_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EDM62376.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator, LysR family
L1_008_000M1_scaffold_1028_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20580..21719
DNA (1140bp) protein (380aa)
Cysteine desulfurase family protein n=2 Tax=Dorea RepID=A6BIN1_9FIRM
Cysteine desulfurase family protein {ECO:0000313|EMBL:CDE19963.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
cysteine desulfurase family protein
L1_008_000M1_scaffold_1028_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21814..22911
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BIN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62378.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
YeeE/YedE family (DUF395).
L1_008_000M1_scaffold_1028_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22962..23165
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19977.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted redox protein, regulator of disulfide bond formation
L1_008_000M1_scaffold_1028_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23168..23404
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62380.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Protein of unknown function (DUF3343).
L1_008_000M1_scaffold_1028_25
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23538..24125)
DNA (588bp) protein (196aa)
Transcriptional regulator TetR family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FXJ6_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDE19979.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
TetR family transcriptional regulator
L1_008_000M1_scaffold_1028_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24231..25265)
DNA (1035bp) protein (345aa)
Proline racemase {ECO:0000313|EMBL:EDM62382.1}; EC=5.1.1.4 {ECO:0000313|EMBL:EDM62382.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Proline racemase (EC:5.1.1.4)
Proline racemase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FYH5_9FIRM
L1_008_000M1_scaffold_1028_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25811..27226
DNA (1416bp) protein (472aa)
Respiratory-chain NADH dehydrogenase 51 Kd subunit n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1Y0_9FIRM
Respiratory-chain NADH dehydrogenase 51 Kd subunit {ECO:0000313|EMBL:CDE20007.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
prdC; electron transfer protein
L1_008_000M1_scaffold_1028_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27419..29269
DNA (1851bp) protein (617aa)
D-proline reductase, PrdA proprotein {ECO:0000313|EMBL:EDM62385.1}; EC=1.21.4.1 {ECO:0000313|EMBL:EDM62385.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
prdA; D-proline reductase proprotein prdA [Contains: D-proline reductase subunit beta (D-proline reductase 45 kDa subunit); D-proline reductase subunit alpha (D-proline reductase 23 kDa subunit)] (EC:1.21.4.1)
D-proline reductase, PrdA proprotein n=2 Tax=Dorea RepID=A6BIN9_9FIRM
L1_008_000M1_scaffold_1028_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29287..29586
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BIP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62386.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_1028_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29589..30041
DNA (453bp) protein (151aa)
D-proline reductase, PrdB subunit n=2 Tax=Dorea RepID=A6BIP1_9FIRM
D-proline reductase PrdB subunit {ECO:0000313|EMBL:CDE20119.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
D-proline reductase (dithiol)
Displaying items 1-30 of 41 in total

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