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L1_008_000M1_scaffold_1036

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1036_1
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(388..663)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YW36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD56004.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L1_008_000M1_scaffold_1036_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1087..1863
DNA (777bp) protein (259aa)
DNA replication protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E0L9_9FIRM
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:CBK91390.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_008_000M1_scaffold_1036_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2223..2414)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63926.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_1036_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3071..5035
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FT15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE16867.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_1036_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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5022..5780
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FQS4_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE16868.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1036_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6056..7396
DNA (1341bp) protein (447aa)
Phosphoesterase RecJ domain protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UJE3_RUMA7
phosphoesterase RecJ domain protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ADU23789.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L1_008_000M1_scaffold_1036_7
unknown

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7409..7783
DNA (375bp) protein (125aa)

This feature has no annotations

L1_008_000M1_scaffold_1036_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8002..9183
DNA (1182bp) protein (394aa)
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EDM63908.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDM63908.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
NADPH-dependent butanol dehydrogenase n=2 Tax=Dorea RepID=A6BE69_9FIRM
Alcohol dehydrogenase, class IV
L1_008_000M1_scaffold_1036_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9393..10280
DNA (888bp) protein (296aa)
Ferredoxin--NADP+ reductase, subunit alpha {ECO:0000313|EMBL:EDM63907.1}; EC=1.18.1.2 {ECO:0000313|EMBL:EDM63907.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Ferredoxin--NADP+ reductase, subunit alpha n=2 Tax=Dorea RepID=A6BE68_9FIRM
L1_008_000M1_scaffold_1036_10
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10280..11674
DNA (1395bp) protein (465aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH) homotetrameric n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWN3_9FIRM
Glutamate synthase (NADPH) homotetrameric {ECO:0000313|EMBL:CDE18142.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_1036_11
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11959..14001
DNA (2043bp) protein (681aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUE5_9FIRM
L1_008_000M1_scaffold_1036_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14123..14602
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Dorea RepID=A6BE64_9FIRM
conserved hypothetical protein TIGR00246
L1_008_000M1_scaffold_1036_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14732..15604
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BE63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18145.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_1036_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15712..16119)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63900.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_1036_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16320..17369
DNA (1050bp) protein (350aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE60_9FIRM
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDM63899.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
endonuclease/exonuclease/phosphatase
L1_008_000M1_scaffold_1036_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17486..17593
DNA (108bp) protein (36aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BE59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18148.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_1036_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17544..19583
DNA (2040bp) protein (680aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FS64_9FIRM
L1_008_000M1_scaffold_1036_18
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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19662..19934
DNA (273bp) protein (91aa)
Putative sporulation protein YqfC n=2 Tax=Dorea RepID=A6BE57_9FIRM
Putative sporulation protein YqfC {ECO:0000313|EMBL:CDE18150.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
sporulation protein YqfC
L1_008_000M1_scaffold_1036_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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19947..21212
DNA (1266bp) protein (422aa)
Putative sporulation protein YqfD n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU18_9FIRM
Putative sporulation protein YqfD {ECO:0000313|EMBL:CDE18151.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Putative stage IV sporulation protein YqfD.
L1_008_000M1_scaffold_1036_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21216..22232
DNA (1017bp) protein (339aa)
KH domain protein n=2 Tax=Dorea RepID=A6BE55_9FIRM
KH domain protein {ECO:0000313|EMBL:CDE18152.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Phosphate starvation-inducible protein PhoH, predicted ATPase
L1_008_000M1_scaffold_1036_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22229..22723
DNA (495bp) protein (165aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Endoribonuclease YbeY n=2 Tax=Dorea RepID=A6BE54_9FIRM
conserved hypothetical protein TIGR00043
L1_008_000M1_scaffold_1036_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22769..24439
DNA (1671bp) protein (557aa)
Polysaccharide biosynthesis protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE53_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDM63892.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
stage V sporulation protein B
L1_008_000M1_scaffold_1036_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24443..25264
DNA (822bp) protein (274aa)
Putative pyridoxal kinase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BE52_9FIRM
Putative pyridoxal kinase {ECO:0000313|EMBL:EDM63891.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
phosphomethylpyrimidine kinase type-1
L1_008_000M1_scaffold_1036_24
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25311..25682
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FU23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18156.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_1036_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25713..25934
DNA (222bp) protein (74aa)
UPF0291 protein DORLON_00566 n=2 Tax=Dorea RepID=A6BE50_9FIRM
UPF0291 protein DORLON_00566 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_1036_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25912..26487
DNA (576bp) protein (192aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Dorea longicatena CAG:42 RepID=R7FTK6_9FIRM
L1_008_000M1_scaffold_1036_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26508..26690
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BE48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18162.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_1036_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26739..26921
DNA (183bp) protein (61aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Dorea RepID=A6BE47_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_000M1_scaffold_1036_29
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26893..28128
DNA (1236bp) protein (412aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Dorea RepID=A6BE47_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L1_008_000M1_scaffold_1036_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28198..28656
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18168.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
Displaying items 1-30 of 58 in total

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