ggKbase home page

L1_008_000M1_scaffold_1040

Search features with annotation key words

Displaying items 31-49 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1040_31
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30343..31032)
DNA (690bp) protein (230aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=D4MUZ6_9FIRM
transcriptional regulator, GntR family
FCD domain protein {ECO:0000313|EMBL:EDS20540.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1040_32
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31161..31865
DNA (705bp) protein (235aa)
Channel protein, hemolysin III family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q0H8_9FIRM
Channel protein, hemolysin III family {ECO:0000313|EMBL:EKY21391.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
channel protein, hemolysin III family
L1_008_000M1_scaffold_1040_33
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31848..32123)
DNA (276bp) protein (92aa)
Predicted endonuclease containing a URI domain n=5 Tax=Clostridiales RepID=D4MUZ4_9FIRM
Predicted endonuclease containing a URI domain
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EDS20538.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1040_34
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32263..32997)
DNA (735bp) protein (245aa)
Membrane-bound metallopeptidase n=3 Tax=Clostridiales RepID=D4MUZ3_9FIRM
Membrane-bound metallopeptidase
Peptidase, M23 family {ECO:0000313|EMBL:EKY21389.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_35
unknown

Not on your lists

comp(32990..33922)
DNA (933bp) protein (311aa)
SpoIID/LytB domain n=2 Tax=Clostridiales RepID=D4MUZ2_9FIRM
SpoIID/LytB domain
SpoIID/LytB domain {ECO:0000313|EMBL:CBL39208.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_36
unknown

Not on your lists

33996..34256
DNA (261bp) protein (87aa)
Phosphotransferase System HPr (HPr) Family n=2 Tax=Clostridiales RepID=D4MUZ1_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL39207.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_37
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34353..35807
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=2 Tax=Lachnospiraceae RepID=E5VN62_9FIRM
L1_008_000M1_scaffold_1040_38
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35834..36568
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases n=3 Tax=Clostridiales RepID=D4MUY9_9FIRM
L1_008_000M1_scaffold_1040_39
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36601..37089
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=L1Q069_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21384.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_1040_40
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37181..37675)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P5C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS20531.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L1_008_000M1_scaffold_1040_41
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37705..38499)
DNA (795bp) protein (265aa)
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase n=4 Tax=Clostridiales RepID=B0P5C7_9CLOT
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000313|EMBL:EFV15732.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1040_42
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38520..39230)
DNA (711bp) protein (237aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
RNA pseudouridine synthase n=4 Tax=Clostridiales RepID=B0P5C6_9CLOT
RNA pseudouridine synthase {ECO:0000313|EMBL:EKY21381.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_43
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39240..39929)
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=5 Tax=Clostridiales RepID=D4MUY4_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:EKY21380.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_44
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39931..41418)
DNA (1488bp) protein (496aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q063_9FIRM
Signal transduction histidine kinase
L1_008_000M1_scaffold_1040_45
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41501..42691)
DNA (1191bp) protein (397aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EDS20526.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDS20526.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EDS20526.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=4 Tax=Clostridiales RepID=B0P5C3_9CLOT
L1_008_000M1_scaffold_1040_46
unknown

Not on your lists

comp(42702..43091)
DNA (390bp) protein (130aa)
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Aspartate 1-decarboxylase n=5 Tax=Clostridiales RepID=D4MUY1_9FIRM
L1_008_000M1_scaffold_1040_47
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43110..43952)
DNA (843bp) protein (281aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VN36_9FIRM
L1_008_000M1_scaffold_1040_48
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44031..44858)
DNA (828bp) protein (276aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=5 Tax=Clostridiales RepID=D4MUX9_9FIRM
L1_008_000M1_scaffold_1040_49
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44855..45703)
DNA (849bp) protein (283aa)
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4MUX8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV15741.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Displaying items 31-49 of 49 in total

View Taxonomy