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L1_008_000M1_scaffold_1040

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1040_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..396)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD22943.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_008_000M1_scaffold_1040_2
unknown

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comp(854..1642)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031BE5BA
L1_008_000M1_scaffold_1040_3
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1707..2624)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q0Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21340.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
dTDP-glucose pyrophosphorylase
L1_008_000M1_scaffold_1040_4
unknown

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comp(2662..3780)
DNA (1119bp) protein (373aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBL39238.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBL39238.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
UDP-galactopyranose mutase n=2 Tax=Clostridiales RepID=D4MV22_9FIRM
L1_008_000M1_scaffold_1040_5
unknown

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comp(3784..5247)
DNA (1464bp) protein (488aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=2 Tax=Clostridiales RepID=D4MV21_9FIRM
Membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CBL39237.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_6
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5244..6323)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P5G1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS20564.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1040_7
unknown

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comp(6380..7462)
DNA (1083bp) protein (361aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Clostridiales RepID=D4MV19_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL39235.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_8
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7459..8271)
DNA (813bp) protein (271aa)
Mannosyltransferase OCH1 and related enzymes n=2 Tax=Clostridiales RepID=D4MV18_9FIRM
Mannosyltransferase OCH1 and related enzymes
Uncharacterized protein {ECO:0000313|EMBL:EDS20562.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1040_9
unknown

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comp(8285..9406)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P5F8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39233.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_10
unknown

Not on your lists

comp(9421..10368)
DNA (948bp) protein (316aa)
Glycosyl transferase family 2 n=2 Tax=Clostridiales RepID=D4MV16_9FIRM
Glycosyl transferase family 2.
Glycosyl transferase family 2 {ECO:0000313|EMBL:CBL39232.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_11
unknown

Not on your lists

comp(10405..11427)
DNA (1023bp) protein (341aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Clostridiales RepID=D4MV15_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL39231.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_12
unknown

Not on your lists

comp(11449..12351)
DNA (903bp) protein (301aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Clostridiales RepID=D4MV14_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBL39230.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_13
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12368..12865)
DNA (498bp) protein (166aa)
Glycosyltransferase family 28 C-terminal domain protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P5F4_9CLOT
Glycosyltransferase family 28 C-terminal domain protein {ECO:0000313|EMBL:EDS20557.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
putative glycosyltransferase
L1_008_000M1_scaffold_1040_14
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12877..13326)
DNA (450bp) protein (150aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase n=2 Tax=Clostridiales RepID=D4MV13_9FIRM
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
Oligosaccharide biosynthesis protein Alg14 like protein {ECO:0000313|EMBL:EDS20556.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1040_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13343..14767)
DNA (1425bp) protein (475aa)
Sugar transferases involved in lipopolysaccharide synthesis (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=2 Tax=Lachnospiraceae RepID=L1Q089_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EKY21409.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14795..15475)
DNA (681bp) protein (227aa)
Chain length determinant protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLV0_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EFV16189.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Capsular polysaccharide biosynthesis protein
L1_008_000M1_scaffold_1040_17
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15554..15967)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16190.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1040_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15958..17409)
DNA (1452bp) protein (484aa)
Bacterial group 2 Ig-like protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q142_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EKY21405.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Glycerophosphoryl diester phosphodiesterase
L1_008_000M1_scaffold_1040_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17501..20227)
DNA (2727bp) protein (909aa)
Bacterial membrane protein YfhO n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q085_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:EKY21404.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted membrane protein
L1_008_000M1_scaffold_1040_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20375..20791
DNA (417bp) protein (139aa)
GtrA-like protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q0B8_9FIRM
GtrA-like protein {ECO:0000313|EMBL:EKY21403.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted membrane protein
L1_008_000M1_scaffold_1040_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20859..21788)
DNA (930bp) protein (310aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1A5_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EKY21402.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21811..23034)
DNA (1224bp) protein (408aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Clostridiales RepID=D4MV04_9FIRM
hypothetical protein
YbbR-like protein {ECO:0000313|EMBL:EKY21401.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23012..23890)
DNA (879bp) protein (293aa)
TIGR00159 family protein n=2 Tax=Clostridiales RepID=B0P5E5_9CLOT
DisA bacterial checkpoint controller nucleotide-binding protein {ECO:0000313|EMBL:EFV15714.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1040_24
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23887..24885)
DNA (999bp) protein (333aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P5E4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA33122.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1040_25
unknown

Not on your lists

comp(24863..25318)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P5E3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39218.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_26
unknown

Not on your lists

comp(25418..25963)
DNA (546bp) protein (182aa)
Rubrerythrin n=5 Tax=Clostridiales RepID=D4MV01_9FIRM
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:CBL39217.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_27
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26096..26491)
DNA (396bp) protein (132aa)
Fe2+/Zn2+ uptake regulation proteins n=5 Tax=Clostridiales RepID=D4MV00_9FIRM
Fe2+/Zn2+ uptake regulation proteins
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EKY21396.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1040_28
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26680..28083)
DNA (1404bp) protein (468aa)
FAD/FMN-containing dehydrogenases (EC:1.1.3.15)
FAD/FMN-containing dehydrogenases n=2 Tax=Clostridiales RepID=D4MUZ9_9FIRM
Putative glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:EDS20543.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1040_29
unknown

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comp(28089..29288)
DNA (1200bp) protein (400aa)
Electron transfer flavoprotein, alpha subunit n=2 Tax=Clostridiales RepID=D4MUZ8_9FIRM
Electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:CBL39214.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1040_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29298..30086)
DNA (789bp) protein (263aa)
Electron transfer flavoprotein, beta subunit n=6 Tax=Firmicutes RepID=D4MUZ7_9FIRM
Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein domain-containing protein {ECO:0000313|EMBL:CDA33116.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Displaying items 1-30 of 49 in total

View Taxonomy