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L1_008_000M1_scaffold_1046

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Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1046_1
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(145..2646)
DNA (2502bp) protein (834aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IKR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22525.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L1_008_000M1_scaffold_1046_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2651..5386)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NLV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80997.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L1_008_000M1_scaffold_1046_3
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(5621..6436)
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PRZ3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL70959.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
hypothetical protein
L1_008_000M1_scaffold_1046_4
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6472..6816)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J0A4_BUTFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK73543.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_1046_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6986..8197)
DNA (1212bp) protein (404aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine dehydratase medium form n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0Z2_9FIRM
Threonine dehydratase medium form {ECO:0000313|EMBL:CCY97690.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1046_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8200..9138)
DNA (939bp) protein (313aa)
Signal recognition particle receptor FtsY n=3 Tax=Clostridiales RepID=D4LHP8_9FIRM
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1046_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9157..12717)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK33_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
condensin subunit Smc
L1_008_000M1_scaffold_1046_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12732..13412)
DNA (681bp) protein (227aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKS9_9FIRM
L1_008_000M1_scaffold_1046_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13402..13650)
DNA (249bp) protein (83aa)
Acyl carrier protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1Q2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Acyl carrier protein
L1_008_000M1_scaffold_1046_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13727..14773)
DNA (1047bp) protein (349aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphate acyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N722_9FIRM
phosphate:acyl-[acyl carrier protein] acyltransferase
L1_008_000M1_scaffold_1046_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15022..16854)
DNA (1833bp) protein (611aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0Z7_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CCY97695.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000M1_scaffold_1046_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17371..18099
DNA (729bp) protein (243aa)
Response regulator receiver protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK38_9FIRM
Response regulator receiver protein {ECO:0000313|EMBL:CCY97696.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_1046_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18038..19786)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97697.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L1_008_000M1_scaffold_1046_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20107..21474)
DNA (1368bp) protein (456aa)
Na+-driven multidrug efflux pump n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1Q7_9FIRM
Na+-driven multidrug efflux pump {ECO:0000313|EMBL:CCY97698.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Na+-driven multidrug efflux pump
L1_008_000M1_scaffold_1046_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21570..21752)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=4 Tax=Clostridiales RepID=D4LHQ9_9FIRM
ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1046_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21756..22283)
DNA (528bp) protein (176aa)
Predicted metal-binding possibly nucleic acid-binding protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N100_9FIRM
Predicted metal-binding possibly nucleic acid-binding protein {ECO:0000313|EMBL:CCY97700.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L1_008_000M1_scaffold_1046_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22539..23729)
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=Clostridiales RepID=R5NK41_9FIRM
L1_008_000M1_scaffold_1046_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23818..24921)
DNA (1104bp) protein (368aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKT9_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CCY97702.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1046_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25089..26366
DNA (1278bp) protein (426aa)
UPF0348 protein BN514_02026 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1R1_9FIRM
UPF0348 protein BN514_02026 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted nucleotidyltransferase
L1_008_000M1_scaffold_1046_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26356..27525)
DNA (1170bp) protein (390aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N730_9FIRM
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CCY97704.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Aspartate/tyrosine/aromatic aminotransferase
L1_008_000M1_scaffold_1046_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27714..28502)
DNA (789bp) protein (263aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N104_9FIRM
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CCY97705.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type uncharacterized transport system, ATPase component
L1_008_000M1_scaffold_1046_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28506..29432)
DNA (927bp) protein (309aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK46_9FIRM
ABC transporter {ECO:0000313|EMBL:CCY97706.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1046_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29489..30517)
DNA (1029bp) protein (343aa)
ABC transporter substrate binding protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKU4_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:CCY97707.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type uncharacterized transport system, periplasmic component
L1_008_000M1_scaffold_1046_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31019..32383)
DNA (1365bp) protein (455aa)
UPF0210 protein CK1_12100 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1R5_9FIRM
UPF0210 protein BN514_02031 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1046_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32504..32776)
DNA (273bp) protein (91aa)
UPF0237 protein BN514_02032 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N735_9FIRM
UPF0237 protein BN514_02032 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ACT domain-containing protein
L1_008_000M1_scaffold_1046_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32773..33507)
DNA (735bp) protein (245aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N109_9FIRM
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:CCY97710.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L1_008_000M1_scaffold_1046_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33494..34093)
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK50_9FIRM
L1_008_000M1_scaffold_1046_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34094..36733)
DNA (2640bp) protein (880aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKU8_9FIRM
L1_008_000M1_scaffold_1046_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36736..37083)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97713.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1046_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37345..38214
DNA (870bp) protein (290aa)
EDD domain protein DegV family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N741_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CCY97714.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
EDD domain protein, DegV family
Displaying items 1-30 of 90 in total

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