ggKbase home page

L1_008_000M1_scaffold_1051

Search features with annotation key words

Displaying items 31-60 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1051_31
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

38155..39699
DNA (1545bp) protein (515aa)
ABC transporter permease n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7ARL2_9FIRM
ABC transporter permease {ECO:0000313|EMBL:CDD63493.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
ABC transporter permease
L1_008_000M1_scaffold_1051_32
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

39706..41856
DNA (2151bp) protein (717aa)
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BEN7_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component {ECO:0000313|EMBL:CDD63492.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
Oligopeptide ABC transporter, ATPase component
L1_008_000M1_scaffold_1051_33
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

41849..42943
DNA (1095bp) protein (365aa)
ABC-type transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BDI0_9FIRM
ABC-type transport system ATPase component {ECO:0000313|EMBL:CDD63491.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
ABC transporter ATPase
L1_008_000M1_scaffold_1051_34
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

42944..43357
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BCQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD63490.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
L1_008_000M1_scaffold_1051_35
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

43535..44212
DNA (678bp) protein (226aa)
Polar amino acid ABC transporter inner membrane subunit n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GUK3_9FIRM
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:CCY21015.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
polar amino acid ABC transporter inner membrane subunit
L1_008_000M1_scaffold_1051_36
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

44216..44950
DNA (735bp) protein (245aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.21)
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GZ24_9FIRM
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CCY21014.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L1_008_000M1_scaffold_1051_37
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45032..46027
DNA (996bp) protein (332aa)
Bacterial extracellular solute-binding protein family 3 n=2 Tax=root RepID=R7JTC1_9FIRM
Bacterial extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CDE66891.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
amino acid ABC transporter substrate-binding protein
L1_008_000M1_scaffold_1051_38
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46655..47887
DNA (1233bp) protein (411aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
Tyrosine--tRNA ligase n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V2S1_CLOSS
hypothetical protein
L1_008_000M1_scaffold_1051_39
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48144..49361
DNA (1218bp) protein (406aa)
Carbohydrate esterase Family 12 n=2 Tax=Clostridium RepID=R5TWN8_9CLOT
Carbohydrate esterase Family 12 {ECO:0000313|EMBL:CCZ61292.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
est12A; carbohydrate esterase 12 Est12A
L1_008_000M1_scaffold_1051_40
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49412..51373
DNA (1962bp) protein (654aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:45 RepID=R6NL52_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDC11950.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_1051_41
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

51394..52827
DNA (1434bp) protein (478aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YNP5_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDD30236.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_1051_42
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(52899..53210)
DNA (312bp) protein (104aa)
Uncharacterized protein n=6 Tax=Bacillus cereus RepID=J9C153_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJV85171.1}; TaxID=1053207 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuB1-1.;"
hypothetical protein
L1_008_000M1_scaffold_1051_43
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53233..53871)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LKX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET58726.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_008_000M1_scaffold_1051_44
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54107..56026
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JSX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS37228.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_008_000M1_scaffold_1051_45
unknown

Not on your lists

56288..57238
DNA (951bp) protein (317aa)

This feature has no annotations

L1_008_000M1_scaffold_1051_46
unknown

Not on your lists

57243..57983
DNA (741bp) protein (247aa)

This feature has no annotations

L1_008_000M1_scaffold_1051_47
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57983..58615
DNA (633bp) protein (211aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZD3_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFF68677.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L1_008_000M1_scaffold_1051_48
unknown

Not on your lists

58618..59316
DNA (699bp) protein (233aa)

This feature has no annotations

L1_008_000M1_scaffold_1051_49
unknown

Not on your lists

comp(59351..59554)
DNA (204bp) protein (68aa)
Putative transposase YhgA-like n=1 Tax=Roseburia sp. CAG:100 RepID=R7R5I1_9FIRM
L1_008_000M1_scaffold_1051_50
unknown

Not on your lists

59868..61193
DNA (1326bp) protein (442aa)

This feature has no annotations

L1_008_000M1_scaffold_1051_51
unknown

Not on your lists

61224..62009
DNA (786bp) protein (262aa)

This feature has no annotations

L1_008_000M1_scaffold_1051_52
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

61996..62901
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TGM2_9CLOT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGD46353.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L1_008_000M1_scaffold_1051_53
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

62908..63546
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZ95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76335.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_1051_54
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63674..64441)
DNA (768bp) protein (256aa)
Transcriptional regulator AraC family n=1 Tax=Clostridium sp. CAG:149 RepID=R5M0W6_9CLOT
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY83189.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
AraC-type DNA-binding domain-containing proteins
L1_008_000M1_scaffold_1051_55
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

64682..66001
DNA (1320bp) protein (440aa)
Family 4 glycosyl hydrolase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH96_9FIRM
Family 4 glycosyl hydrolase {ECO:0000313|EMBL:CDB86868.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
glycoside hydrolase
L1_008_000M1_scaffold_1051_56
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66154..67200)
DNA (1047bp) protein (349aa)
M42 glutamyl aminopeptidase n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJQ4_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EET59177.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
glutamyl aminopeptidase M42 family protein
L1_008_000M1_scaffold_1051_57
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67641..68585
DNA (945bp) protein (315aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B511_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66888.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ABC transporter periplasmic subunit-1
L1_008_000M1_scaffold_1051_58
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68606..69520
DNA (915bp) protein (305aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AM26_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:ERI66889.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
lplC1; protein LplC
L1_008_000M1_scaffold_1051_59
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

69601..71208
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32819.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
putative ABC-type sugar transport system, periplasmic component
L1_008_000M1_scaffold_1051_60
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

71369..73573
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KHP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN32818.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
DNA-binding domain-containing protein
Displaying items 31-60 of 69 in total

View Taxonomy