ggKbase home page

L1_008_000M1_scaffold_1104

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1104_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(10..2409)
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N930_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94412.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(2427..3389)
DNA (963bp) protein (321aa)
Copper amine oxidase domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MEH9_9FIRM
Copper amine oxidase domain protein {ECO:0000313|EMBL:CDB94409.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
copper amine oxidase N-domain protein
L1_008_000M1_scaffold_1104_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(3438..4274)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N924_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94407.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(4296..4625)
DNA (330bp) protein (110aa)
Peptidase propeptide and YpeB domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MEH4_9FIRM
Peptidase propeptide and YpeB domain protein {ECO:0000313|EMBL:CDB94404.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(4645..6195)
DNA (1551bp) protein (517aa)
Papain family cysteine protease n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M438_9FIRM
Papain family cysteine protease {ECO:0000313|EMBL:CDB94403.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_6
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(6222..6749)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N918_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94402.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_1104_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(6861..7022)
DNA (162bp) protein (54aa)
Rubredoxin n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MJC5_9FIRM
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
rubredoxin
L1_008_000M1_scaffold_1104_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(7186..11817)
DNA (4632bp) protein (1544aa)
Putative LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M7C5_9FIRM
Putative LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:CDB94400.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
roundabout, axon guidance receptor 3
L1_008_000M1_scaffold_1104_9
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(11888..12451)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MEH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94399.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
peptidase S8/S53 subtilisin kexin sedolisin
L1_008_000M1_scaffold_1104_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(12473..12778)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M431_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94398.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_1104_11
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(12739..13782)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N912_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB94397.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_12
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(13866..14546)
DNA (681bp) protein (227aa)
Putative manganese catalase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MJC0_9FIRM
Putative manganese catalase {ECO:0000313|EMBL:CDB94396.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
manganese containing catalase
L1_008_000M1_scaffold_1104_13
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(14546..14806)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97515.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(14806..15000)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NID2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97512.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_1104_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

15134..15646
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97510.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Amidases related to nicotinamidase
L1_008_000M1_scaffold_1104_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

15761..17230
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MD47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97508.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
alpha-N-arabinofuranosidase
L1_008_000M1_scaffold_1104_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

17230..17475
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97505.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_18
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

17477..18145
DNA (669bp) protein (223aa)
Predicted amidophosphoribosyltransferases n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MD42_9FIRM
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CDB97503.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ComFC; amidophosphoribosyltransferase
L1_008_000M1_scaffold_1104_19
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

18203..18859
DNA (657bp) protein (219aa)
Spore cortex-lytic enzyme n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MFZ6_9FIRM
Spore cortex-lytic enzyme {ECO:0000313|EMBL:CDB97500.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
spore cortex-lytic enzyme
L1_008_000M1_scaffold_1104_20
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

18872..18982
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NIA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB97497.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_1104_21
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(19020..22280)
DNA (3261bp) protein (1087aa)
Beta-galactosidase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MNF5_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CDB97494.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
beta-galactosidase
L1_008_000M1_scaffold_1104_22
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

22445..23467
DNA (1023bp) protein (341aa)
Predicted oxidoreductases of the aldo/keto reductase family n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NI83_9FIRM
Predicted oxidoreductases of the aldo/keto reductase family {ECO:0000313|EMBL:CDB97492.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Predicted oxidoreductases of the aldo/keto reductase family
L1_008_000M1_scaffold_1104_23
unknown

Not on your lists

comp(23776..23988)
DNA (213bp) protein (71aa)

This feature has no annotations

L1_008_000M1_scaffold_1104_24
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists


comp(24014..25714)
DNA (1701bp) protein (567aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MD15_9FIRM
L1_008_000M1_scaffold_1104_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

25889..27715
DNA (1827bp) protein (609aa)
GTP-binding protein TypA n=2 Tax=root RepID=R6MFV8_9FIRM
GTP-binding protein TypA {ECO:0000313|EMBL:CDB97485.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
GTP-binding protein TypA
L1_008_000M1_scaffold_1104_26
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(27764..28057)
DNA (294bp) protein (98aa)
Transcriptional regulator XRE family n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MD08_9FIRM
Transcriptional regulator XRE family {ECO:0000313|EMBL:CDB97483.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
DNA-binding protein, putative
L1_008_000M1_scaffold_1104_27
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(28069..28380)
DNA (312bp) protein (104aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NI71_9FIRM
ksgA; dimethyladenosine transferase KsgA
L1_008_000M1_scaffold_1104_28
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists


comp(28416..28868)
DNA (453bp) protein (151aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NI71_9FIRM
16S rRNA methyltransferase
L1_008_000M1_scaffold_1104_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(28969..29520)
DNA (552bp) protein (184aa)
Putative manganese efflux pump MntP n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MFV3_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_1104_30
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

29888..31549
DNA (1662bp) protein (554aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
leuA1; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MD03_9FIRM
Displaying items 1-30 of 47 in total

View Taxonomy