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L1_008_000M1_scaffold_1114

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1114_1
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(673..2094)
DNA (1422bp) protein (474aa)
MATE efflux family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CR46_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI69776.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_1114_2
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2096..2767)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36933.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_1114_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(2887..3441)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y402_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28575.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_1114_4
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3696..4619
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B48342
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ72913.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
L1_008_000M1_scaffold_1114_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(5105..6244)
DNA (1140bp) protein (380aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J109_9FIRM
Signal transduction histidine kinase
L1_008_000M1_scaffold_1114_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6241..6918)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=3 Tax=Clostridiales RepID=E9SNK9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94071.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_1114_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7194..8111
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKK7_9FIRM
Putative electron transport protein YccM {ECO:0000313|EMBL:KJJ74813.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L1_008_000M1_scaffold_1114_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8132..9112
DNA (981bp) protein (327aa)
Redoxin family protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ADD1_9CLOT
Thiol-disulfide oxidoreductase ResA {ECO:0000313|EMBL:KJJ74815.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
AhpC/TSA family.
L1_008_000M1_scaffold_1114_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9209..10327
DNA (1119bp) protein (373aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
Methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase {ECO:0000313|EMBL:CBK99705.1}; EC=1.8.4.11 {ECO:0000313|EMBL:CBK99705.1};; EC=1.8.4.12 {ECO:0000313|EMBL:CBK99705.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K0A6_9FIRM
L1_008_000M1_scaffold_1114_10
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10430..13900)
DNA (3471bp) protein (1157aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031CDCD1
Uncharacterized protein {ECO:0000313|EMBL:CCY75966.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L1_008_000M1_scaffold_1114_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(13897..14250)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41565.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_1114_12
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14411..15040)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CQ15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32616.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L1_008_000M1_scaffold_1114_13
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15037..15663)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RYN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68860.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L1_008_000M1_scaffold_1114_14
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15650..16012)
DNA (363bp) protein (121aa)
Tat pathway signal sequence domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RYN7_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFF68861.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L1_008_000M1_scaffold_1114_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15999..16547)
DNA (549bp) protein (183aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Ruminococcus lactaris RepID=B5CQ12_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDY32613.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_1114_16
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(16766..17773)
DNA (1008bp) protein (336aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GMD7_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CCX93746.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
NAD-dependent epimerase/dehydratase
L1_008_000M1_scaffold_1114_17
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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17947..18516
DNA (570bp) protein (190aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EM18_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX93745.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Transcriptional regulator
L1_008_000M1_scaffold_1114_18
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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18813..19355
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1J6_ROSHA
Protocadherin domain {ECO:0000313|EMBL:KFI81660.1}; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophilum.;"
hypothetical protein
L1_008_000M1_scaffold_1114_19
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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19973..20875
DNA (903bp) protein (301aa)
YihY family protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y3Q1_9FIRM
YihY family protein {ECO:0000313|EMBL:CDD30603.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ribonuclease BN
L1_008_000M1_scaffold_1114_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

20850..22136
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YGX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30604.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
RNA polymerase sigma factor sigma-70 family protein
L1_008_000M1_scaffold_1114_21
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

22142..22546
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y9N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30605.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_1114_22
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

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22682..24163
DNA (1482bp) protein (494aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BBF7_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
neurotransmitter:Na+ symporter
L1_008_000M1_scaffold_1114_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24418..25302)
DNA (885bp) protein (295aa)
Phage protein Gp37/Gp68 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZNB2_9FIRM
Phage protein Gp37/Gp68 {ECO:0000313|EMBL:EFQ05346.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Gp37Gp68 family protein
L1_008_000M1_scaffold_1114_24
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25314..26444)
DNA (1131bp) protein (377aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase {ECO:0000313|EMBL:CBL22849.1}; EC=2.7.1.31 {ECO:0000313|EMBL:CBL22849.1};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Glycerate kinase n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LPZ1_9FIRM
L1_008_000M1_scaffold_1114_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26570..27859)
DNA (1290bp) protein (430aa)
Transporter, CPA2 family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Y4_9FIRM
Transporter, CPA2 family {ECO:0000313|EMBL:EDP22140.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
transporter, CPA2 family (2.A.37)
L1_008_000M1_scaffold_1114_26
Solanum lycopersicum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

comp(28434..29615)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Solanum lycopersicum RepID=K4BSY4_SOLLC
Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc04g057910.2.1}; TaxID=4081 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon.;" source="Solanum lycopersicum (Tomato) (Lycopersicon esculentum).;"
L1_008_000M1_scaffold_1114_27
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29763..31265)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3Z4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37820.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L1_008_000M1_scaffold_1114_28
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31279..33504)
DNA (2226bp) protein (742aa)
bgxA1; periplasmic beta-glucosidase/beta-xylosidase BgxA (EC:3.2.1.21 3.2.1.37)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JN22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE64282.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
L1_008_000M1_scaffold_1114_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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33751..35394
DNA (1644bp) protein (548aa)
Sulphate transporter n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S615_9FIRM
Sulphate transporter {ECO:0000313|EMBL:CCZ46284.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
sulfate transporter
Displaying 29 items

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