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L1_008_000M1_scaffold_1158

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1158_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..423
DNA (423bp) protein (141aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Helicase, RecD/TraA family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9L4_9FIRM
L1_008_000M1_scaffold_1158_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(592..1395)
DNA (804bp) protein (268aa)
ABC-type uncharacterized transport system, ATPase component n=2 Tax=Roseburia intestinalis RepID=D4KLH3_9FIRM
ABC-type uncharacterized transport system, ATPase component
ABC-type uncharacterized transport system, ATPase component {ECO:0000313|EMBL:CBL07725.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1158_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1388..2335)
DNA (948bp) protein (316aa)
ABC transporter permease protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6K6_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDA54626.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type uncharacterized transport system, permease component
L1_008_000M1_scaffold_1158_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2363..3439)
DNA (1077bp) protein (359aa)
ABC-type uncharacterized transport system, periplasmic component n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2A3_9FIRM
ABC-type uncharacterized transport system, periplasmic component
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:CBL13743.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1158_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3735..4427
DNA (693bp) protein (231aa)
Predicted amidophosphoribosyltransferases n=3 Tax=Roseburia RepID=D4KLH6_9FIRM
Predicted amidophosphoribosyltransferases
Predicted amidophosphoribosyltransferases {ECO:0000313|EMBL:CBL07728.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1158_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4432..4851
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=D4L2A5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13745.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1158_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4910..5047
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2A6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13746.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1158_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5060..5536
DNA (477bp) protein (159aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G9K8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54619.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1158_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5591..6589
DNA (999bp) protein (333aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G9K7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07732.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1158_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6704..7534
DNA (831bp) protein (277aa)
TIGR00159 family protein n=2 Tax=Roseburia RepID=C7G9K6_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:EEV01556.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_1158_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7473..8813
DNA (1341bp) protein (447aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Roseburia intestinalis RepID=D4KLI1_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL07733.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1158_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8842..10191
DNA (1350bp) protein (450aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Phosphoglucosamine mutase n=2 Tax=Roseburia RepID=D4KLI2_9FIRM
L1_008_000M1_scaffold_1158_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10230..10493
DNA (264bp) protein (88aa)
Phosphotransferase System HPr (HPr) Family n=4 Tax=Roseburia RepID=D4KLI3_9FIRM
Phosphotransferase System HPr (HPr) Family
Phosphotransferase System HPr (HPr) Family {ECO:0000313|EMBL:CBL07735.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1158_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10497..11369
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=3 Tax=Roseburia RepID=D4KLI4_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDA54613.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1158_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11374..13011
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BMN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54612.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_1158_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13042..14163
DNA (1122bp) protein (374aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBL13756.1}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBL13756.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
dTDP-glucose 4,6-dehydratase n=2 Tax=Roseburia intestinalis RepID=D4L2B6_9FIRM
L1_008_000M1_scaffold_1158_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..15246
DNA (972bp) protein (324aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBL13757.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBL13757.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2B7_9FIRM
L1_008_000M1_scaffold_1158_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15273..15857
DNA (585bp) protein (195aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CBL13758.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CBL13758.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2B8_9FIRM
L1_008_000M1_scaffold_1158_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15868..16701
DNA (834bp) protein (278aa)
ABC-2 type transporter n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9J7_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L1_008_000M1_scaffold_1158_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16740..18014
DNA (1275bp) protein (425aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=2 Tax=Roseburia intestinalis RepID=D4L2C0_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBL13760.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1158_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18038..20092
DNA (2055bp) protein (685aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV01545.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_1158_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20118..21575
DNA (1458bp) protein (486aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CBL07744.1}; EC=2.7.8.6 {ECO:0000313|EMBL:CBL07744.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=3 Tax=Roseburia intestinalis RepID=D4KLJ2_9FIRM
L1_008_000M1_scaffold_1158_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21590..22876
DNA (1287bp) protein (429aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7G9J3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07745.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1158_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22866..23942
DNA (1077bp) protein (359aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G9J2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54603.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1158_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23961..24761
DNA (801bp) protein (267aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G9J1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54602.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1158_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24807..25931
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B6I8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54601.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1158_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25888..27105
DNA (1218bp) protein (406aa)
Glycosyltransferase n=3 Tax=Roseburia RepID=D4L2C7_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBL13767.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1158_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27688..28221
DNA (534bp) protein (178aa)
Glycosyltransferase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KLJ9_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CDA54599.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1158_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28367..29521
DNA (1155bp) protein (385aa)
Glycosyltransferase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2C9_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBL13769.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1158_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29542..30447
DNA (906bp) protein (302aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46 5.1.3.2)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9I6_9FIRM
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEV01536.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Displaying items 1-30 of 42 in total

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