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L1_008_000M1_scaffold_1163

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1163_1
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5Y6_9CLOT
Flavodoxin/nitric oxide synthase {ECO:0000313|EMBL:CDE10066.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L1_008_000M1_scaffold_1163_2
Firmicutes bacterium CAG:460, Firmicutes, Bacteria

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comp(235..723)
DNA (489bp) protein (163aa)
Putative membrane protein n=2 Tax=Bacteria RepID=R5Y8L7_9MOLU
Putative membrane protein {ECO:0000313|EMBL:CDE48577.1}; TaxID=1263024 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:460.;"
hypothetical protein
L1_008_000M1_scaffold_1163_3

Not on your lists

comp(861..1481)
DNA (621bp) protein (207aa)
VanZ like protein n=1 Tax=human gut metagenome RepID=K1SFX5_9ZZZZ
VanZ like protein {ECO:0000313|EMBL:EKC46326.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
vanZ; teicoplanin resistance protein
L1_008_000M1_scaffold_1163_4
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1497..2450)
DNA (954bp) protein (318aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=environmental samples RepID=R6Z6P4_9CLOT
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDE55192.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
serine-type D-Ala-D-Ala carboxypeptidase
L1_008_000M1_scaffold_1163_5
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2561..3787)
DNA (1227bp) protein (409aa)
ABC-type Na+ efflux pump permease component-like protein n=1 Tax=Clostridium sp. CAG:452 RepID=R6XZ10_9CLOT
ABC-type Na+ efflux pump permease component-like protein {ECO:0000313|EMBL:CDD26860.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
sodium ABC transporter permease
L1_008_000M1_scaffold_1163_6
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3789..4697)
DNA (909bp) protein (303aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:389 RepID=R7LNN0_9CLOT
ABC transporter related {ECO:0000313|EMBL:CDE90190.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
yhaQ; putative ABC transporter ATP-binding protein YhaQ
L1_008_000M1_scaffold_1163_7
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4809..5135)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5PX25_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ18604.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
cysteine methyltransferase
L1_008_000M1_scaffold_1163_8
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5146..5322)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6C1F5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59282.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
L1_008_000M1_scaffold_1163_9
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5342..5977)
DNA (636bp) protein (212aa)
Predicted Zn-dependent hydrolases of the beta-lactamase fold n=1 Tax=Clostridium sp. CAG:440 RepID=R7GF08_9CLOT
Predicted Zn-dependent hydrolases of the beta-lactamase fold {ECO:0000313|EMBL:CDE25383.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
Predicted Zn-dependent hydrolases of the beta-lactamase fold
L1_008_000M1_scaffold_1163_10
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6160..6435
DNA (276bp) protein (92aa)
Bacterial nucleoid protein Hbs n=1 Tax=Clostridium sp. CAG:798 RepID=R6XF05_9CLOT
Bacterial nucleoid protein Hbs {ECO:0000313|EMBL:CDD17679.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
DNA-binding protein HU
L1_008_000M1_scaffold_1163_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6712..7995)
DNA (1284bp) protein (428aa)
UPI0003D5E147 related cluster n=1 Tax=unknown RepID=UPI0003D5E147
Uncharacterized protein {ECO:0000313|EMBL:ETI83251.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_1163_12
unknown

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comp(8222..8707)
DNA (486bp) protein (162aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_13
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8694..9509)
DNA (816bp) protein (272aa)
Ribosomal protein S1 n=3 Tax=Clostridium acetobutylicum RepID=F0K7Z1_CLOAE
rpsA; Ribosomal protein S1
Ribosomal protein S1 {ECO:0000313|EMBL:AAK79925.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L1_008_000M1_scaffold_1163_14
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9565..9825)
DNA (261bp) protein (87aa)
Plasmid transfer factor TraK n=3 Tax=Clostridium acetobutylicum RepID=F7ZU54_CLOAT
putative plasmid transfer factor, TraK
Possible plasmid transfer factor, TraK {ECO:0000313|EMBL:AAK79929.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
L1_008_000M1_scaffold_1163_15
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9902..11344)
DNA (1443bp) protein (481aa)
ATPase involved in conjugal plasmid transfer n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R8F9_THETN
Conjugal transfer protein TraG {ECO:0000313|EMBL:KHO63169.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
TraG; conjugal plasmid transfer ATPase
L1_008_000M1_scaffold_1163_16
unknown

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comp(11322..12206)
DNA (885bp) protein (295aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12459..13064)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R8F6_THETN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25222.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
L1_008_000M1_scaffold_1163_18
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(13141..13404)
DNA (264bp) protein (88aa)
Putative septation protein SpoVG n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CDH3_9CLOT
spoVG; Putative septation protein SpoVG
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
L1_008_000M1_scaffold_1163_19
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13472..17905)
DNA (4434bp) protein (1478aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5QBT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ18572.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
Cna B domain protein
L1_008_000M1_scaffold_1163_20
unknown

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comp(17856..18023)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(18109..19068)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q9K0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25248.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1163_22
Clostridium sp. CAG:440, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19183..19857)
DNA (675bp) protein (225aa)
Sortase SrtB family n=1 Tax=Clostridium sp. CAG:440 RepID=R7GE98_9CLOT
Sortase SrtB family {ECO:0000313|EMBL:CDE25326.1}; TaxID=1262807 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:440.;"
hypothetical protein
L1_008_000M1_scaffold_1163_23
unknown

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comp(19974..20123)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20135..20566)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KSP1_CLOB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP25693.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L1_008_000M1_scaffold_1163_25
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20625..20894)
DNA (270bp) protein (90aa)
Peptidase M23B n=1 Tax=Clostridium sp. CAG:389 RepID=R7LQB4_9CLOT
Peptidase M23B {ECO:0000313|EMBL:CDD36658.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L1_008_000M1_scaffold_1163_26
unknown

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comp(21001..21309)
DNA (309bp) protein (103aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_27
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21302..22288)
DNA (987bp) protein (329aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6Z9X9_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD37711.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
hypothetical protein
L1_008_000M1_scaffold_1163_28
unknown

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comp(22293..22475)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_29
unknown

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comp(22588..22788)
DNA (201bp) protein (67aa)

This feature has no annotations

L1_008_000M1_scaffold_1163_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22812..24689)
DNA (1878bp) protein (626aa)
AAA ATPase n=2 Tax=Clostridium botulinum RepID=B1L357_CLOBM
Putative AAA ATPase {ECO:0000313|EMBL:BAP25689.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
AAA ATPase
Displaying items 1-30 of 38 in total

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