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L1_008_000M1_scaffold_1174

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1174_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(274..2748)
DNA (2475bp) protein (825aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:CBL21135.1}; EC=6.3.5.3 {ECO:0000313|EMBL:CBL21135.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMS4_9FIRM
L1_008_000M1_scaffold_1174_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2802..3821)
DNA (1020bp) protein (340aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Blautia sp. KLE 1732 RepID=U2EFD6_9FIRM
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:ERI93222.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L1_008_000M1_scaffold_1174_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3893..4771
DNA (879bp) protein (293aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N395_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY98455.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulator
L1_008_000M1_scaffold_1174_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4840..5676)
DNA (837bp) protein (279aa)
ATPases involved in chromosome partitioning n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NM96_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CCY98456.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ATPases involved in chromosome partitioning
L1_008_000M1_scaffold_1174_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5772..6149)
DNA (378bp) protein (126aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNA1_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY98457.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1174_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6164..6391)
DNA (228bp) protein (76aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5N3X1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21131.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1174_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6565..7137
DNA (573bp) protein (191aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9D1_9FIRM
L1_008_000M1_scaffold_1174_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7219..8640)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3A3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98460.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1174_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8655..9275)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98461.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1174_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9285..10013)
DNA (729bp) protein (243aa)
Predicted glutamine amidotransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNA7_9FIRM
Predicted glutamine amidotransferase {ECO:0000313|EMBL:CCY98462.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glutamine amidotransferase
L1_008_000M1_scaffold_1174_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10010..11344)
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramyl tripeptide synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3X6_9FIRM
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:CCY98463.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
UDP-N-acetylmuramyl tripeptide synthase
L1_008_000M1_scaffold_1174_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11375..12226)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98464.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1174_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12223..12381)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2EK22_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL21122.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1174_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12479..13219)
DNA (741bp) protein (247aa)
Response regulator of the LytR/AlgR family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3A9_9FIRM
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CCY98465.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_1174_15
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13419..13955)
DNA (537bp) protein (179aa)
50S ribosomal protein L17 n=3 Tax=Clostridiales RepID=U2DA65_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
LSU ribosomal protein L17P
L1_008_000M1_scaffold_1174_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14132..15091)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNB3_9FIRM
DNA-directed RNA polymerase subunit alpha
L1_008_000M1_scaffold_1174_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15176..15769)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y1_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
SSU ribosomal protein S4P
L1_008_000M1_scaffold_1174_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15786..16178)
DNA (393bp) protein (131aa)
30S ribosomal protein S11 n=3 Tax=Clostridiales RepID=D4LMQ6_9FIRM
SSU ribosomal protein S11P
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1174_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16234..16602)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=5 Tax=Clostridiales RepID=D4LMQ5_9FIRM
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1174_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17282..18013
DNA (732bp) protein (244aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMB3_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY98471.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted membrane protein
L1_008_000M1_scaffold_1174_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18257..19441)
DNA (1185bp) protein (395aa)
SCP-like protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNC1_9FIRM
SCP-like protein {ECO:0000313|EMBL:CCY98472.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1174_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19763..20017
DNA (255bp) protein (85aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY98473.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator, XRE family
L1_008_000M1_scaffold_1174_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21186..22007)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98474.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1174_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22169..23815)
DNA (1647bp) protein (549aa)
alpha,alpha-phosphotrehalase (EC:3.2.1.93)
Alpha alpha-phosphotrehalase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3C1_9FIRM
Alpha alpha-phosphotrehalase {ECO:0000313|EMBL:CCY98475.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1174_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23876..25855)
DNA (1980bp) protein (660aa)
PTS system protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMB8_9FIRM
PTS system protein {ECO:0000313|EMBL:CCY98476.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.4)/PTS system trehalose-specific IIA component, Glc family (TC 4.A.1.2.4)
L1_008_000M1_scaffold_1174_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26156..26881
DNA (726bp) protein (242aa)
Transcriptional regulator GntR family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNC7_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCY98477.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator, GntR family
L1_008_000M1_scaffold_1174_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27006..28328
DNA (1323bp) protein (441aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Z1_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_1174_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28441..30618)
DNA (2178bp) protein (726aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9F7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98479.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1174_29
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30792..31010)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=12 Tax=Clostridiales RepID=D4LMP9_9FIRM
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L1_008_000M1_scaffold_1174_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31045..31695)
DNA (651bp) protein (217aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP70_9FIRM
Displaying items 1-30 of 68 in total

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