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L1_008_000M1_scaffold_1196

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1196_1
unknown

Not on your lists

1..93
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

L1_008_000M1_scaffold_1196_2
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

367..534
-----------------
DNA (168bp)
protein (56aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S220_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF67722.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L1_008_000M1_scaffold_1196_3
unknown

Not on your lists

607..837
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

L1_008_000M1_scaffold_1196_4
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

951..1766
-----------------
DNA (816bp)
protein (272aa)
Uncharacterized protein n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z263_EUBE2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR71253.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L1_008_000M1_scaffold_1196_5
unknown

Not on your lists

2218..2409
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_1196_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2440..3222
-----------------
DNA (783bp)
protein (261aa)
Sporulation initiation inhibitor protein Soj n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4L1_9CLOT
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:CDD73041.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ATPases involved in chromosome partitioning
L1_008_000M1_scaffold_1196_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3215..4117
-----------------
DNA (903bp)
protein (301aa)
ParB-like protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5J9_9CLOT
ParB-like protein {ECO:0000313|EMBL:CDD73042.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ParB-like partition proteins
L1_008_000M1_scaffold_1196_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4110..4511
-----------------
DNA (402bp)
protein (134aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6V1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
single-strand binding protein
L1_008_000M1_scaffold_1196_9
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4520..5614
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52135.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L1_008_000M1_scaffold_1196_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5562..5816
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73045.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_1196_11
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5913..6926
-----------------
DNA (1014bp)
protein (338aa)
SCP-like protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C4L4_9CLOT
SCP-like protein {ECO:0000313|EMBL:CDD73046.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_1196_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7126..11136
-----------------
DNA (4011bp)
protein (1337aa)
Cna protein B-type domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5K3_9CLOT
Cna protein B-type domain protein {ECO:0000313|EMBL:CDD73047.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_1196_13
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11379..12074
-----------------
DNA (696bp)
protein (232aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7C906_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD74430.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_1196_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12107..12898
-----------------
DNA (792bp)
protein (264aa)
Uncharacterized protein n=4 Tax=root RepID=R7C8D6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR73874.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_1196_15
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12947..13252)
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B590A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL36524.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_008_000M1_scaffold_1196_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13375..14175
-----------------
DNA (801bp)
protein (267aa)
Sortase, SrtB family n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7L6_9FIRM
Sortase, SrtB family {ECO:0000313|EMBL:EDM50923.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
sortase, SrtB family
L1_008_000M1_scaffold_1196_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14175..14699
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LA06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET62413.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
L1_008_000M1_scaffold_1196_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14736..15593
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36091.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1196_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15760..16128
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R7A028_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36092.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1196_20
unknown

Not on your lists

16082..16204
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

L1_008_000M1_scaffold_1196_21
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16258..23958
-----------------
DNA (7701bp)
protein (2567aa)
SNF2 family N-domain-containing protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QWN1_9FIRM
SNF2 family N-domain-containing protein {ECO:0000313|EMBL:CDF41725.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
putative adenine-specific DNA methylase
L1_008_000M1_scaffold_1196_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24000..25109
-----------------
DNA (1110bp)
protein (370aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUH2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31100.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L1_008_000M1_scaffold_1196_23
unknown

Not on your lists

25125..25253
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

L1_008_000M1_scaffold_1196_24
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25243..27348
-----------------
DNA (2106bp)
protein (702aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HVV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO15818.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
DNA repair proteins
L1_008_000M1_scaffold_1196_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27385..29799
-----------------
DNA (2415bp)
protein (805aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36100.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Domain of unknown function DUF87.
L1_008_000M1_scaffold_1196_26
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29881..30711
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JR29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS36669.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_008_000M1_scaffold_1196_27
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30748..30921
-----------------
DNA (174bp)
protein (58aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJN8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS46431.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_008_000M1_scaffold_1196_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31134..32807
-----------------
DNA (1674bp)
protein (558aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36101.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
CHAP domain.
L1_008_000M1_scaffold_1196_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32908..33624
-----------------
DNA (717bp)
protein (239aa)
PT repeat-containing protein n=1 Tax=Roseburia sp. CAG:309 RepID=R7A037_9FIRM
PT repeat-containing protein {ECO:0000313|EMBL:CDD36102.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1196_30
unknown

Not on your lists

33733..33909
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

View Taxonomy