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L1_008_000M1_scaffold_1208

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1208_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..505)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24744.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1208_2
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(587..2437)
DNA (1851bp) protein (617aa)
ABC transporter n=2 Tax=Coprobacillus RepID=E7GF57_9FIRM
ABC transporter {ECO:0000313|EMBL:EFW03336.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_1208_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2437..4167)
DNA (1731bp) protein (577aa)
ABC transporter n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GF58_9FIRM
ABC transporter {ECO:0000313|EMBL:EFW03337.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_1208_4
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4211..4654)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GF59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03338.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Transcriptional regulators
L1_008_000M1_scaffold_1208_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4779..6002
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Peptidase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G8F1_9FIRM
Peptidase, M20 family
L1_008_000M1_scaffold_1208_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6151..7440)
DNA (1290bp) protein (430aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
Putative PTS system cellobiose-specific IIC component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMB1_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1208_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7453..8850)
DNA (1398bp) protein (466aa)
6-phospho-beta-glucosidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3E0_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:CCZ23325.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Glycoside hydrolase, family 1
L1_008_000M1_scaffold_1208_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8853..9698)
DNA (846bp) protein (282aa)
Transcriptional regulator RpiR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QAD9_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCZ23324.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RpiR family transcriptional regulator
L1_008_000M1_scaffold_1208_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10035..10964)
DNA (930bp) protein (310aa)
Oligopeptide ABC transporter ATP-binding protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5Z8_9FIRM
Oligopeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFW06649.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L1_008_000M1_scaffold_1208_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10964..12049)
DNA (1086bp) protein (362aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQM5_9FIRM
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:CCZ23322.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
L1_008_000M1_scaffold_1208_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12052..12984)
DNA (933bp) protein (311aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMA6_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CCZ23321.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_1208_12
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12987..13931)
DNA (945bp) protein (315aa)
Putative oligopeptide transport system permease protein OppB n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PS53_9FIRM
Putative oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:ERK46609.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_1208_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14020..14553)
DNA (534bp) protein (178aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q474_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ23318.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_1208_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14498..15610)
DNA (1113bp) protein (371aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_1208_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15915..16448)
DNA (534bp) protein (178aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_1208_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16393..17508)
DNA (1116bp) protein (372aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_1208_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17719..18522)
DNA (804bp) protein (268aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_1208_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18526..19311)
DNA (786bp) protein (262aa)
ABC-type oligopeptide transport system periplasmic component n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q642_9FIRM
ABC-type oligopeptide transport system periplasmic component {ECO:0000313|EMBL:CCZ24230.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_1208_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19397..20272)
DNA (876bp) protein (292aa)
fructokinase (EC:2.7.1.4)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24231.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1208_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20402..21184)
DNA (783bp) protein (261aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Pyruvate formate-lyase activating enzyme n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTA3_9FIRM
pyruvate formate-lyase activating enzyme
L1_008_000M1_scaffold_1208_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21220..23484)
DNA (2265bp) protein (755aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6Q6_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:CCZ24233.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1208_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23721..24410
DNA (690bp) protein (230aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QD18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24234.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1208_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(24436..26922)
DNA (2487bp) protein (829aa)
Excinuclease ATPase subunit n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EL21_9FIRM
Excinuclease ATPase subunit {ECO:0000313|EMBL:CDB01273.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Excinuclease ATPase subunit
L1_008_000M1_scaffold_1208_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27065..27706)
DNA (642bp) protein (214aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Deoxyribose-phosphate aldolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTA8_9FIRM
deoxyribose-phosphate aldolase
L1_008_000M1_scaffold_1208_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27684..29150)
DNA (1467bp) protein (489aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6R1_9FIRM
L1_008_000M1_scaffold_1208_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29150..30430)
DNA (1281bp) protein (427aa)
tRNA methylthiotransferase YqeV n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QD23_9FIRM
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:CCZ24239.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
MiaB family RNA modification protein
L1_008_000M1_scaffold_1208_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30439..31191)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q651_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24240.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_1208_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31188..31928)
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPV6_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1208_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32111..34678)
DNA (2568bp) protein (856aa)
Putative ATP-dependent chaperone protein ClpB n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTB3_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
clpC; Class III stress response-related ATPase
L1_008_000M1_scaffold_1208_30
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(34920..35279)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NQR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF94457.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Predicted ATPase (AAA+ superfamily)
Displaying items 1-30 of 38 in total

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