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L1_008_000M1_scaffold_1218

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1218_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..295
DNA (294bp) protein (98aa)
Site-specific recombinase XerD n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4H7_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK98420.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L1_008_000M1_scaffold_1218_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(672..3554)
DNA (2883bp) protein (961aa)
UvrABC system protein A n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R3_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
uvrA; UvrABC system protein A
L1_008_000M1_scaffold_1218_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3541..5598)
DNA (2058bp) protein (686aa)
UvrABC system protein B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R4_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Excinuclease ABC subunit B
L1_008_000M1_scaffold_1218_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5683..6408)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97500.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
DNA repair protein radc
L1_008_000M1_scaffold_1218_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6723..7733
DNA (1011bp) protein (337aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EEU97501.1}; EC=5.4.99.- {ECO:0000313|EMBL:EEU97501.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12)
Pseudouridine synthase, RluA family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R7_9FIRM
L1_008_000M1_scaffold_1218_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7721..8098
DNA (378bp) protein (126aa)
PAS domain S-box protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R8_9FIRM
PAS domain S-box protein {ECO:0000313|EMBL:EEU97502.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_1218_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8250..9431)
DNA (1182bp) protein (394aa)
Metallo-beta-lactamase domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3R9_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEU97503.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized flavoproteins
L1_008_000M1_scaffold_1218_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9521..10852)
DNA (1332bp) protein (444aa)
RmuC domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S0_9FIRM
RmuC domain protein {ECO:0000313|EMBL:EEU97504.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_1218_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10856..12337)
DNA (1482bp) protein (494aa)
Transglutaminase-like protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S1_9FIRM
Transglutaminase-like protein {ECO:0000313|EMBL:EEU97505.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Transglutaminase-like enzymes, putative cysteine proteases
L1_008_000M1_scaffold_1218_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12356..13429)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97506.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Esterase/lipase
L1_008_000M1_scaffold_1218_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13756..14274
DNA (519bp) protein (173aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S4_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU97508.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_008_000M1_scaffold_1218_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14388..14870
DNA (483bp) protein (161aa)
SsrA-binding protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S5_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
SsrA-binding protein
L1_008_000M1_scaffold_1218_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15259..15759)
DNA (501bp) protein (167aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EEU97510.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EEU97510.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S6_9FIRM
L1_008_000M1_scaffold_1218_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15763..18174)
DNA (2412bp) protein (804aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3S7_9FIRM
L1_008_000M1_scaffold_1218_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18193..19215)
DNA (1023bp) protein (341aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Faecalibacterium RepID=C7H3S8_9FIRM
L1_008_000M1_scaffold_1218_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20134..21345
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T1_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEU97263.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Major Facilitator Superfamily.
L1_008_000M1_scaffold_1218_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21400..22842)
DNA (1443bp) protein (481aa)
Cation transport protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T2_9FIRM
Cation transport protein {ECO:0000313|EMBL:EEU97264.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Trk-type K+ transport systems, membrane components
L1_008_000M1_scaffold_1218_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22855..24213)
DNA (1359bp) protein (453aa)
Potassium transporter peripheral membrane component n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T3_9FIRM
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EEU97265.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
K+ transport systems, NAD-binding component
L1_008_000M1_scaffold_1218_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24261..25580)
DNA (1320bp) protein (440aa)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EEU97266.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EEU97266.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
thymidine phosphorylase (EC:2.4.2.2 2.4.2.4)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T4_9FIRM
L1_008_000M1_scaffold_1218_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25736..26653)
DNA (918bp) protein (306aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T6_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU97268.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
nucleoside ABC transporter membrane protein
L1_008_000M1_scaffold_1218_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26655..27824)
DNA (1170bp) protein (390aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T7_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEU97269.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
nucleoside ABC transporter membrane protein
L1_008_000M1_scaffold_1218_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27831..29363)
DNA (1533bp) protein (511aa)
Putative phage tail component domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3T8_9FIRM
Putative phage tail component domain protein {ECO:0000313|EMBL:EEU97270.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ABC transporter
L1_008_000M1_scaffold_1218_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29601..30776)
DNA (1176bp) protein (392aa)
Basic membrane protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U0_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EEU97272.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
L1_008_000M1_scaffold_1218_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30979..31428)
DNA (450bp) protein (150aa)
Cytidine deaminase {ECO:0000313|EMBL:EEU97273.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EEU97273.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cytidine deaminase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U1_9FIRM
cytidine deaminase, homotetrameric
L1_008_000M1_scaffold_1218_25
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31442..31885)
DNA (444bp) protein (148aa)
Cytidine deaminase homotetrameric n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PZW2_9FIRM
Cytidine deaminase homotetrameric {ECO:0000313|EMBL:CDC29075.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
cytidine deaminase, homotetrameric
L1_008_000M1_scaffold_1218_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32033..32299
DNA (267bp) protein (89aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U3_9FIRM
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:EEU97275.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
addiction module antitoxin, RelB/DinJ family
L1_008_000M1_scaffold_1218_27
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32305..32499
DNA (195bp) protein (65aa)
Addiction module toxin n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R448_9FIRM
Addiction module toxin {ECO:0000313|EMBL:CDC29082.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
addiction module toxin
L1_008_000M1_scaffold_1218_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32551..33270)
DNA (720bp) protein (240aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
purine-nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U4_9FIRM
L1_008_000M1_scaffold_1218_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33495..35381)
DNA (1887bp) protein (629aa)
Peptidase, M23 family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U6_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EEU97278.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Membrane proteins related to metalloendopeptidases
L1_008_000M1_scaffold_1218_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35512..36429)
DNA (918bp) protein (306aa)
Pseudouridine synthase, RluA family {ECO:0000313|EMBL:EEU97279.1}; EC=5.4.99.- {ECO:0000313|EMBL:EEU97279.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Pseudouridylate synthases, 23S RNA-specific (EC:5.4.99.12)
Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3U7_9FIRM
Displaying items 1-30 of 70 in total

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