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L1_008_000M1_scaffold_1223

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1223_1
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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389..736
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E8I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98631.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L1_008_000M1_scaffold_1223_2
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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911..1195
DNA (285bp) protein (95aa)
Helix-turn-helix domain protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E7B1_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDD98630.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_1223_3
unknown

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1605..1808
DNA (204bp) protein (68aa)

This feature has no annotations

L1_008_000M1_scaffold_1223_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1973..2959
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X0Y7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ08976.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Abi-like protein.
L1_008_000M1_scaffold_1223_5
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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3297..3929
DNA (633bp) protein (211aa)
VanZ like family protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YV30_9FIRM
VanZ like family protein {ECO:0000313|EMBL:CDA31303.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
VanZ like family.
L1_008_000M1_scaffold_1223_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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4166..4309
DNA (144bp) protein (48aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P4C2_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31302.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1223_7
unknown

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comp(4369..5130)
DNA (762bp) protein (254aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CBL38531.1}; EC=1.1.1.69 {ECO:0000313|EMBL:CBL38531.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=2 Tax=Clostridiales RepID=D4N0Y6_9FIRM
L1_008_000M1_scaffold_1223_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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5413..6330
DNA (918bp) protein (306aa)
dTDP-glucose pyrophosphorylase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZB28_9FIRM
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:CDA31301.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
dTDP-glucose pyrophosphorylase
L1_008_000M1_scaffold_1223_9
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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6685..7770
DNA (1086bp) protein (362aa)
Phage integrase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJN7_9FIRM
Phage integrase {ECO:0000313|EMBL:EFV16934.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
phage integrase family protein
L1_008_000M1_scaffold_1223_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7760..9202
DNA (1443bp) protein (481aa)
Phage integrase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJN6_9FIRM
Phage integrase {ECO:0000313|EMBL:EFV16933.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
phage integrase family protein
L1_008_000M1_scaffold_1223_11
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9192..10742
DNA (1551bp) protein (517aa)
Phage integrase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VPJ9_9FIRM
Phage integrase {ECO:0000313|EMBL:EFV15197.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
phage integrase family protein
L1_008_000M1_scaffold_1223_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10720..11142
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VPK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15198.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1223_13
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11153..11332
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VPK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15199.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1223_14
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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11442..11789
DNA (348bp) protein (116aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P4C5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31300.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1223_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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11824..12864
DNA (1041bp) protein (347aa)
Ser/Thr phosphatase family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QAJ0_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EKY24946.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
metallophosphoesterase
L1_008_000M1_scaffold_1223_16
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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12868..14190
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QBF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY24947.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_1223_17
unknown

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14244..15227
DNA (984bp) protein (328aa)
Transcriptional regulator, LacI family n=4 Tax=Clostridiales RepID=D4N0Z0_9FIRM
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:CBL38535.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1223_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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15463..17388
DNA (1926bp) protein (642aa)
PTS system protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZB23_9FIRM
PTS system protein {ECO:0000313|EMBL:CDA31296.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
PTS system sucrose-specific IIA component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIB component, Glc family (TC 4.A.1.2.12)/PTS system sucrose-specific IIC component, Glc family (TC 4.A.1.2.12)
L1_008_000M1_scaffold_1223_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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17423..18889
DNA (1467bp) protein (489aa)
beta-fructofuranosidase (EC:3.2.1.26)
Sucrose-6-phosphate hydrolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QBF4_9FIRM
Sucrose-6-phosphate hydrolase {ECO:0000313|EMBL:EKY24952.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1223_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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18879..19853
DNA (975bp) protein (325aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Sugar kinases, ribokinase family n=4 Tax=Clostridiales RepID=D4N0Z3_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EKY24953.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1223_21
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20061..21203
DNA (1143bp) protein (381aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YV21_9FIRM
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDA31293.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1223_22
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21223..22020
DNA (798bp) protein (266aa)
Electron transfer flavoprotein, beta subunit n=4 Tax=Clostridiales RepID=D4N0Z5_9FIRM
Electron transfer flavoprotein, beta subunit
Electron transfer flavoprotein domain-containing protein {ECO:0000313|EMBL:EFV16041.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1223_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22040..23035
DNA (996bp) protein (332aa)
Electron transfer flavoprotein, alpha subunit n=3 Tax=Clostridiales RepID=D4N0Z6_9FIRM
Electron transfer flavoprotein, alpha subunit
Electron transfer flavoprotein domain-containing protein {ECO:0000313|EMBL:EFV16040.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1223_24
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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23252..24010
DNA (759bp) protein (253aa)
Electron transfer flavoprotein domain-containing protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YWR5_9FIRM
Electron transfer flavoprotein domain-containing protein {ECO:0000313|EMBL:CDA31290.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Electron transfer flavoprotein, beta subunit
L1_008_000M1_scaffold_1223_25
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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24024..25034
DNA (1011bp) protein (337aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z3I6_9FIRM
Electron transfer flavoprotein FAD-binding domain protein {ECO:0000313|EMBL:CDA31289.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Electron transfer flavoprotein, alpha subunit
L1_008_000M1_scaffold_1223_26
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25233..26423)
DNA (1191bp) protein (397aa)
H+/gluconate symporter and related permeases n=4 Tax=Clostridiales RepID=D4N0Z9_9FIRM
H+/gluconate symporter and related permeases
Citrate transporter {ECO:0000313|EMBL:CDA31288.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1223_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26516..28063)
DNA (1548bp) protein (516aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
propionate CoA-transferase (EC:2.8.3.1)
Acetate CoA-transferase YdiF n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZQR7_9FIRM
L1_008_000M1_scaffold_1223_28
unknown

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comp(28087..28863)
DNA (777bp) protein (259aa)
Enoyl-CoA hydratase/carnithine racemase (EC:4.2.1.55)
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:CBL38546.1}; EC=4.2.1.55 {ECO:0000313|EMBL:CBL38546.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Enoyl-CoA hydratase/carnithine racemase n=4 Tax=Clostridiales RepID=D4N101_9FIRM
L1_008_000M1_scaffold_1223_29
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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29188..30330
DNA (1143bp) protein (381aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase n=4 Tax=Clostridiales RepID=D4N102_9FIRM
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:CDA31285.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1223_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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30542..30964
DNA (423bp) protein (141aa)
Transcriptional regulators n=4 Tax=Clostridiales RepID=D4N103_9FIRM
Transcriptional regulators
MarR family protein {ECO:0000313|EMBL:CDA31284.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Displaying items 1-30 of 37 in total

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