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L1_008_000M1_scaffold_1233

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1233_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..4081)
DNA (4080bp) protein (1360aa)
wapA1; tRNA(Glu)-specific nuclease WapA (EC:3.1.-.-)
Putative cell wall associated protein n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EHN0_CLOPA
Putative cell wall associated protein/ RHS repeat family {ECO:0000313|EMBL:AEB75043.1}; TaxID=929506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum BKT015925.;"
L1_008_000M1_scaffold_1233_2
unknown

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4452..4844
DNA (393bp) protein (131aa)

This feature has no annotations

L1_008_000M1_scaffold_1233_3
unknown

Not on your lists

comp(4888..5748)
DNA (861bp) protein (287aa)

This feature has no annotations

L1_008_000M1_scaffold_1233_4
Bacillus wakoensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5770..6318)
DNA (549bp) protein (183aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Paenibacillus alvei A6-6i-x RepID=S9U9W9_PAEAL
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:GAE26470.1}; TaxID=1236970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus wakoensis JCM 9140.;"
ECF subfamily RNA polymerase sigma-24 factor
L1_008_000M1_scaffold_1233_5
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6329..6670)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCV9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52770.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_1233_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6960..7370
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B482_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50073.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L1_008_000M1_scaffold_1233_7

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7370..7660
DNA (291bp) protein (97aa)
Phage holin n=1 Tax=Clostridium tetani 12124569 RepID=U6EYA1_CLOTA
Holin {ECO:0000313|EMBL:AJA42752.1}; TaxID=1567009 species="Viruses; unclassified phages.;" source="Clostridium phage phiCT19406A.;"
phage holin
L1_008_000M1_scaffold_1233_8
unknown

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7898..9124
DNA (1227bp) protein (409aa)

This feature has no annotations

L1_008_000M1_scaffold_1233_9
Bacillus halodurans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9234..11888
DNA (2655bp) protein (885aa)
BH1295 protein n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KDB8_BACHD
hypothetical protein
BH1295 protein {ECO:0000313|EMBL:BAB05014.1}; TaxID=272558 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM; 9153 / C-125).;"
L1_008_000M1_scaffold_1233_10
unknown

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comp(12800..13525)
DNA (726bp) protein (242aa)

This feature has no annotations

L1_008_000M1_scaffold_1233_11
unknown

Not on your lists

13749..14603
DNA (855bp) protein (285aa)

This feature has no annotations

L1_008_000M1_scaffold_1233_12
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14657..15265)
DNA (609bp) protein (203aa)
Sortase family protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AD29_9CLOT
hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1233_13
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15972..16436)
DNA (465bp) protein (155aa)
ATPases involved in chromosome partitioning n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZMP8_9CLOT
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDD44634.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
ATPases involved in chromosome partitioning
L1_008_000M1_scaffold_1233_14
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16503..16817)
DNA (315bp) protein (105aa)
Chromosome partitioning protein ParA n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KY08_OSCVS
parA; chromosome partitioning protein ParA
Chromosome partitioning protein ParA {ECO:0000313|EMBL:BAK98612.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_1233_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17605..18642)
DNA (1038bp) protein (346aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3S4_9FIRM
Adenosine deaminase {ECO:0000313|EMBL:CCY43547.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_1233_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18667..19500)
DNA (834bp) protein (278aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:226 RepID=R5BCR0_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX50637.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1233_17
Acetobacter sp. CAG:977, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19716..20246
DNA (531bp) protein (177aa)
Nitroreductase n=1 Tax=Acetobacter sp. CAG:977 RepID=R5Q6Y6_9PROT
Nitroreductase {ECO:0000313|EMBL:CCZ22044.1}; TaxID=1262685 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:977.;"
nitroreductase
L1_008_000M1_scaffold_1233_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20334..21905
DNA (1572bp) protein (524aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
PckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGR0_9CLOT
L1_008_000M1_scaffold_1233_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21973..23349)
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5D6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF68811.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
multi antimicrobial extrusion protein MatE
L1_008_000M1_scaffold_1233_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23568..24623
DNA (1056bp) protein (352aa)
Putative helix-turn-helix protein n=1 Tax=Clostridium sp. D5 RepID=F0YZ16_9CLOT
Putative helix-turn-helix protein {ECO:0000313|EMBL:EGB93022.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_1233_21
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24694..25827
DNA (1134bp) protein (378aa)
Imidazolonepropionase and related amidohydrolases n=1 Tax=Clostridium sp. CAG:81 RepID=R5GIS2_9CLOT
Imidazolonepropionase and related amidohydrolases
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:CCY12411.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L1_008_000M1_scaffold_1233_22
Eubacterium sp. CAG:248, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25852..26598)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:248 RepID=R6JQJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB65023.1}; TaxID=1262885 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:248.;"
hypothetical protein
L1_008_000M1_scaffold_1233_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26760..27881
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF55_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50016.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1233_24
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27878..29359
DNA (1482bp) protein (494aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB15_9CLOT
hypothetical protein
L1_008_000M1_scaffold_1233_25
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29831..30226
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GIR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25373.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
thioesterase
L1_008_000M1_scaffold_1233_26
Porphyromonas endodontalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30263..31087
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JBK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEN82389.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis ATCC 35406.;"
hypothetical protein
L1_008_000M1_scaffold_1233_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31172..32212
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B8L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50569.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1233_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32327..33598
DNA (1272bp) protein (424aa)
Lysine-2 3-aminomutase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5M4_9CLOT
Lysine-2 3-aminomutase {ECO:0000313|EMBL:CCX50568.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_1233_29
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33620..35224
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AR13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51159.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
L1_008_000M1_scaffold_1233_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35225..36016
DNA (792bp) protein (264aa)
B12 binding domain protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGL2_9CLOT
B12 binding domain protein {ECO:0000313|EMBL:CCX50566.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
Displaying items 1-30 of 34 in total

View Taxonomy