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L1_008_000M1_scaffold_1292

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1292_1
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1117
DNA (1116bp) protein (372aa)
glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZH6_CLOCD
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_1292_2

Not on your lists

1300..1569
DNA (270bp) protein (90aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SK66_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC57983.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_1292_3
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1566..2816
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K323_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31336.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
hypothetical protein
L1_008_000M1_scaffold_1292_4
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2835..3647)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FF98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS69445.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L1_008_000M1_scaffold_1292_5
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3804..4787
DNA (984bp) protein (328aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G9U1_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:EFW05200.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L1_008_000M1_scaffold_1292_6
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5014..6204
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JMP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32402.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L1_008_000M1_scaffold_1292_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6231..7520
DNA (1290bp) protein (430aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
GMP synthase (Glutamine-hydrolyzing) domain-containing protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZB5_9FIRM
GMP synthase
L1_008_000M1_scaffold_1292_8
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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7802..7960
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NNH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81582.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L1_008_000M1_scaffold_1292_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8122..9540
DNA (1419bp) protein (473aa)
MATE efflux family protein n=5 Tax=Clostridium difficile RepID=T2UXL1_CLODI
MATE efflux family protein {ECO:0000313|EMBL:CDA09500.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Na+ driven multidrug efflux pump
L1_008_000M1_scaffold_1292_10
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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10227..12074
DNA (1848bp) protein (616aa)
amino acid adenylation protein (EC:5.1.1.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TRS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC76133.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
L1_008_000M1_scaffold_1292_11
unknown

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comp(12659..12790)
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000M1_scaffold_1292_12
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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13209..13379
DNA (171bp) protein (57aa)
ABC transporter ATP binding/permease protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S363_BUTPB
ABC transporter ATP binding/permease
ABC transporter ATP binding/permease protein {ECO:0000313|EMBL:ADL35845.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_008_000M1_scaffold_1292_13
unknown

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13607..13822
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_000M1_scaffold_1292_14
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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14517..15227
DNA (711bp) protein (237aa)
Arylsulfatase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSJ5_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CCY08045.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
radical SAM protein
L1_008_000M1_scaffold_1292_15
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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15215..15856
DNA (642bp) protein (214aa)
Arylsulfatase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSJ5_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CCY08045.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L1_008_000M1_scaffold_1292_16
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15869..16117
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KX54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY69664.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L1_008_000M1_scaffold_1292_17
unknown

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16161..16289
DNA (129bp) protein (43aa)

This feature has no annotations

L1_008_000M1_scaffold_1292_18
Botrytis cinerea, Botrytis, Helotiales, Leotiomycetes, Ascomycota, Fungi

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16471..16719
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Botryotinia fuckeliana (strain T4) RepID=G2XS90_BOTF4
Uncharacterized protein {ECO:0000313|EMBL:CCD43527.1}; TaxID=999810 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis.;" source="Botryotinia fuckeliana (strain T4) (Noble rot fungus) (Botrytis; cinerea).;"
hypothetical protein
L1_008_000M1_scaffold_1292_19
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16781..18619
DNA (1839bp) protein (613aa)
Peptidase S8/S53 family n=1 Tax=Eubacterium sp. CAG:161 RepID=R5L8Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KEO84423.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hypothetical protein
L1_008_000M1_scaffold_1292_20
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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18621..20450
DNA (1830bp) protein (610aa)
ABC transporter n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C1E0
ABC transporter permease {ECO:0000313|EMBL:EST13526.1}; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; Sporolactobacillus.;" source="Sporolactobacillus laevolacticus DSM 442.;"
ABC transporter
L1_008_000M1_scaffold_1292_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20443..22263
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79473.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1292_22
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22511..22702
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MKD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71574.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L1_008_000M1_scaffold_1292_23
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23174..24271
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y1I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58348.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
GltB; glutamate synthase domain 1
L1_008_000M1_scaffold_1292_24
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24271..25581
DNA (1311bp) protein (437aa)
glutamate synthase (NADPH) GltB2 subunit (EC:1.4.1.14 1.4.1.13)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z2N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58349.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L1_008_000M1_scaffold_1292_25
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25760..26191
DNA (432bp) protein (144aa)
4Fe-4S binding domain protein n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6VT96_9FIRM
4Fe-4S ferredoxin {ECO:0000313|EMBL:EXM37495.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L1_008_000M1_scaffold_1292_26
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26196..27443
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y290_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58351.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L1_008_000M1_scaffold_1292_27
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27448..28167
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YLH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58352.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
GltB; glutamate synthase domain 3
L1_008_000M1_scaffold_1292_28
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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28185..29396
DNA (1212bp) protein (404aa)
Glutamine synthetase, type I n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y1I9_9FIRM
Glutamine synthetase, type I {ECO:0000313|EMBL:EPD58353.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L1_008_000M1_scaffold_1292_29
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29427..30011
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J878_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27362.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
response regulator with putative antiterminator output domain
L1_008_000M1_scaffold_1292_30
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30204..30620)
DNA (417bp) protein (139aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Pyridoxal-phosphate dependent TrpB-like enzyme n=1 Tax=Clostridium sp. ASF502 RepID=N2AQY0_9CLOT
Displaying items 1-30 of 45 in total

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