ggKbase home page

L1_008_000M1_scaffold_1301

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1301_1
unknown

Not on your lists

18..221
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MWZ6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL37141.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1301_2
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

236..745
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DBC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87904.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L1_008_000M1_scaffold_1301_3
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

762..920
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C0D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69868.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L1_008_000M1_scaffold_1301_4
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1095..1298
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C2Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA69870.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L1_008_000M1_scaffold_1301_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1310..1471
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CAG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34430.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1301_6
unknown

Not on your lists

1484..2017
DNA (534bp) protein (178aa)

This feature has no annotations

L1_008_000M1_scaffold_1301_7
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2028..2303
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DES6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87907.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L1_008_000M1_scaffold_1301_8
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2306..2860
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI89_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19550.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1301_9
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2873..3448
DNA (576bp) protein (192aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141; / JCM 9156 / N-4).;"
LexA repressor n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TS03_BACCJ
transcriptional repressor, LexA family
L1_008_000M1_scaffold_1301_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3405..3743
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3W8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ39528.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L1_008_000M1_scaffold_1301_11
unknown

Not on your lists

3824..3952
DNA (129bp) protein (43aa)

This feature has no annotations

L1_008_000M1_scaffold_1301_12
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3970..4560
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. DCA RepID=K4KTC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJR47104.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
hypothetical protein
L1_008_000M1_scaffold_1301_13
unknown

Not on your lists

4597..4920
DNA (324bp) protein (108aa)

This feature has no annotations

L1_008_000M1_scaffold_1301_14
unknown

Not on your lists

5090..5416
DNA (327bp) protein (109aa)

This feature has no annotations

L1_008_000M1_scaffold_1301_15
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5420..5839
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6C8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGG85540.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000M1_scaffold_1301_16
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5852..6151
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0THZ2_HELMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ82665.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
L1_008_000M1_scaffold_1301_17
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6166..6687
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09467.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
L1_008_000M1_scaffold_1301_18
unknown

Not on your lists

6699..6971
DNA (273bp) protein (91aa)

This feature has no annotations

L1_008_000M1_scaffold_1301_19
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6972..7142
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JUM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64955.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L1_008_000M1_scaffold_1301_20
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7147..7353
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BSI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX57149.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
L1_008_000M1_scaffold_1301_21
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7364..7732
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40270.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_008_000M1_scaffold_1301_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7729..7923
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LHB6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19227.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_1301_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7927..8715
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9KA09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40272.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_008_000M1_scaffold_1301_24
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8726..9175
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JUL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64945.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L1_008_000M1_scaffold_1301_25
unknown

Not on your lists

9179..9511
DNA (333bp) protein (111aa)

This feature has no annotations

L1_008_000M1_scaffold_1301_26
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9518..9811
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9ND23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77892.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L1_008_000M1_scaffold_1301_27
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9780..10265
DNA (486bp) protein (162aa)
Putative n6 adenine-specific dna methyltransferase protein {ECO:0000313|EMBL:EGW36490.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EGW36490.1};; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
Putative n6 adenine-specific dna methyltransferase protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2G0Y3_9FIRM
Phage modification methylase
L1_008_000M1_scaffold_1301_28
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10279..10932
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N4K6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77891.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L1_008_000M1_scaffold_1301_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10977..11585
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GGN6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA96012.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000M1_scaffold_1301_30
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11655..12242
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M0L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64604.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Displaying items 1-30 of 50 in total

View Taxonomy