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L1_008_000M1_scaffold_1316

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1316_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

187..1143
DNA (957bp) protein (319aa)
Galactose mutarotase n=11 Tax=Bifidobacterium RepID=B3DQS6_BIFLD
aldose-1-epimerase
Galactose mutarotase {ECO:0000313|EMBL:ACD97672.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_1316_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1268..2212
DNA (945bp) protein (315aa)
Galactose mutarotase n=7 Tax=Bifidobacterium RepID=B3DQS5_BIFLD
aldose-1-epimerase
Galactose mutarotase {ECO:0000313|EMBL:ACD97671.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_1316_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2478..2798)
DNA (321bp) protein (107aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DQS3_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN25158.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_000M1_scaffold_1316_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2798..3550)
DNA (753bp) protein (251aa)
RNA polymerase sigma-E factor n=10 Tax=Bifidobacterium RepID=Q8G4M2_BIFLO
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:AEI97264.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_000M1_scaffold_1316_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3725..5278
DNA (1554bp) protein (518aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|HAMAP-Rule:MF_00208, ECO:0000256|SAAS:SAAS00276926};; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
UDP-N-acetylmuramyl-tripeptide synthetase n=7 Tax=Bifidobacterium RepID=MURE_BIFLO
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
L1_008_000M1_scaffold_1316_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5400..6395
DNA (996bp) protein (332aa)
FemAB family n=6 Tax=Bifidobacterium RepID=D6DCT8_BIFLN
FemAB family.
Uncharacterized protein {ECO:0000313|EMBL:CCY95699.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_000M1_scaffold_1316_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6514..10191)
DNA (3678bp) protein (1226aa)
Chromosome partition protein Smc n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBX7_BIFLI
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
condensin subunit Smc
L1_008_000M1_scaffold_1316_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10252..11847)
DNA (1596bp) protein (532aa)
Folylpolyglutamate synthase n=2 Tax=Bifidobacterium longum RepID=B3DQR8_BIFLD
dihydrofolate synthase
Folylpolyglutamate synthase {ECO:0000313|EMBL:ACD97664.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_1316_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13279..13884
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum E18 RepID=V6XX82_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:ESV33803.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
hypothetical protein
L1_008_000M1_scaffold_1316_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14188..15783
DNA (1596bp) protein (532aa)
Xaa-Pro aminopeptidase I n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8API3_BIFLN
pepP; Xaa-Pro aminopeptidase I
Xaa-Pro aminopeptidase I {ECO:0000313|EMBL:AEI97258.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_000M1_scaffold_1316_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15832..16353
DNA (522bp) protein (174aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=Q8G4M9_BIFLO
hypothetical protein
NUDIX domain protein {ECO:0000313|EMBL:EIJ30718.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_000M1_scaffold_1316_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16403..18112)
DNA (1710bp) protein (570aa)
ABC-type peptide transport system ATPase component n=15 Tax=Bifidobacterium RepID=B3DQR4_BIFLD
ABC transporter ATP-binding protein
ABC-type peptide transport system ATPase component {ECO:0000313|EMBL:ACD97660.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_1316_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18116..19285)
DNA (1170bp) protein (390aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=14 Tax=Bifidobacterium RepID=D6DCT1_BIFLN
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ24628.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000M1_scaffold_1316_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19287..20378)
DNA (1092bp) protein (364aa)
DppB1 n=2 Tax=Bifidobacterium longum subsp. longum RepID=E4R1Z9_BIFLM
dppB1; dppb1
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:CCK35220.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_000M1_scaffold_1316_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20542..22176)
DNA (1635bp) protein (545aa)
ABC-type dipeptide transport system periplasmic component n=3 Tax=Bifidobacterium RepID=B3DQR1_BIFLD
ddpA1; ddpa1
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:ACD97657.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_1316_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22456..23739)
DNA (1284bp) protein (428aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1R4_BIFLN
nagA; glucosamine-6-phosphate isomerase
L1_008_000M1_scaffold_1316_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23795..24607)
DNA (813bp) protein (271aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Glucosamine-6-phosphate deaminase n=13 Tax=Bifidobacterium RepID=NAGB_BIFLO
glucosamine-6-phosphate deaminase
L1_008_000M1_scaffold_1316_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24945..26069
DNA (1125bp) protein (375aa)
NagC-type transcriptional regulator n=4 Tax=Bifidobacterium longum RepID=B3DQQ8_BIFLD
ROK family protein
NagC-type transcriptional regulator {ECO:0000313|EMBL:ACD97654.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_1316_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26209..27123)
DNA (915bp) protein (305aa)
ROK family protein n=2 Tax=Bifidobacterium RepID=C2GYA3_BIFLN
ROK family protein {ECO:0000313|EMBL:EEI79883.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
nagc-type transcriptional regulator
L1_008_000M1_scaffold_1316_20
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27350..28564
DNA (1215bp) protein (405aa)
ROK family protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XZQ2_9BIFI
transcriptional repressor
ROK family protein {ECO:0000313|EMBL:EFV36920.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_000M1_scaffold_1316_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28637..29533
DNA (897bp) protein (299aa)
KdgK n=4 Tax=Bifidobacterium RepID=E4R1Z2_BIFLM
kdgK; kdgk
KdgK {ECO:0000313|EMBL:CCY95715.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_000M1_scaffold_1316_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29608..29997
DNA (390bp) protein (130aa)
Lactoylglutathione lyase n=10 Tax=Bifidobacterium RepID=B3DQQ4_BIFLD
glyoxalase
Glyoxalase {ECO:0000313|EMBL:KEY25612.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000M1_scaffold_1316_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30105..30215
DNA (111bp) protein (37aa)
Fucose permease n=8 Tax=Bifidobacterium RepID=B3DQQ3_BIFLD
fucose permease
Uncharacterized protein {ECO:0000313|EMBL:EIJ23828.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000M1_scaffold_1316_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30282..30584
DNA (303bp) protein (101aa)
FucP1 n=8 Tax=Bifidobacterium RepID=E4R1Y9_BIFLM
fucose permease
Uncharacterized protein {ECO:0000313|EMBL:EEI79878.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_000M1_scaffold_1316_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30860..32158
DNA (1299bp) protein (433aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=V6XX94_BIFLN
glycosyl hydrolase
PF06824 family protein {ECO:0000313|EMBL:EIJ23827.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000M1_scaffold_1316_26
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32225..33460
DNA (1236bp) protein (412aa)
N-acyl-D-glucosamine 2-epimerase n=8 Tax=Bifidobacterium RepID=E4R1Y6_BIFLM
n-acyl-d-glucosamine 2-epimerase
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:EFV36915.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L1_008_000M1_scaffold_1316_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33572..34681)
DNA (1110bp) protein (370aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium RepID=V6XWY8_BIFLN
Transcriptional regulator, LacI family
LacI family transcriptional regulator {ECO:0000313|EMBL:KEY25616.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000M1_scaffold_1316_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34923..36674)
DNA (1752bp) protein (584aa)
Glycosyl hydrolase family 85 n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AY69_BIFLN
endo-beta-N-acetylglucosaminidase
Glycosyl hydrolase family 85 {ECO:0000313|EMBL:EIJ24062.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000M1_scaffold_1316_29
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36668..38200)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3AGQ3_BIFBR
Endo-beta-N-acetylglucosaminidase D {ECO:0000313|EMBL:CCY95722.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Endo-beta-N-acetylglucosaminidase
L1_008_000M1_scaffold_1316_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38435..40714)
DNA (2280bp) protein (760aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GY93_BIFLN
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEI79873.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Displaying items 1-30 of 35 in total

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