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L1_008_000M1_scaffold_1326

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1326_1
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..299
DNA (297bp) protein (99aa)
DNA-binding response regulator n=1 Tax=Clostridium sp. CAG:127 RepID=R5PE28_9CLOT
DNA-binding response regulator {ECO:0000313|EMBL:CCZ08161.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
two-component response regulator
L1_008_000M1_scaffold_1326_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(520..795)
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83107.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1326_3
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1109..2158
DNA (1050bp) protein (350aa)
AAA ATPase n=3 Tax=unclassified Lachnospiraceae RepID=E5XFC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83106.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1326_4
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2151..4391
DNA (2241bp) protein (747aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83105.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000M1_scaffold_1326_5
unknown

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4420..5070
DNA (651bp) protein (217aa)

This feature has no annotations

L1_008_000M1_scaffold_1326_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5746..6114
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6BLY4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54417.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6208..6618
DNA (411bp) protein (137aa)
CBS domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AQZ9_9FIRM
CBS domain protein {ECO:0000313|EMBL:CDA54418.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
FOG: CBS domain
L1_008_000M1_scaffold_1326_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6609..7937)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFV8_9FIRM
putative efflux protein, MATE family
MATE efflux family protein {ECO:0000313|EMBL:EEU99301.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_1326_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7939..8907
DNA (969bp) protein (323aa)
Multidrug-efflux transporter 2 regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFV7_9FIRM
Multidrug-efflux transporter 2 regulator {ECO:0000313|EMBL:EEU99302.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_1326_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9229..9711
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99300.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Sporulation and spore germination.
L1_008_000M1_scaffold_1326_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9698..10114
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7GFV5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54422.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10172..11842)
DNA (1671bp) protein (557aa)
Sulfate permease family protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR08_9FIRM
Sulfate permease family protein {ECO:0000313|EMBL:CDA54423.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
high affinity sulphate transporter 1
L1_008_000M1_scaffold_1326_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12106..12426
DNA (321bp) protein (107aa)
O-6-methylguanine DNA methyltransferase n=4 Tax=Roseburia RepID=D4KKZ2_9FIRM
O-6-methylguanine DNA methyltransferase
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CBL14382.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1326_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12572..13003
DNA (432bp) protein (144aa)
Transcriptional regulator, BadM/Rrf2 family n=4 Tax=Roseburia RepID=D4KKZ3_9FIRM
transcriptional regulator, BadM/Rrf2 family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:CBL14383.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1326_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13121..13666
DNA (546bp) protein (182aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6BM01_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07546.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1326_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14187..16187
DNA (2001bp) protein (667aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR14_9FIRM
L1_008_000M1_scaffold_1326_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16322..16681)
DNA (360bp) protein (120aa)
Mn-dependent transcriptional regulator n=4 Tax=Roseburia RepID=D4KKZ6_9FIRM
Mn-dependent transcriptional regulator
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CBL07548.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1326_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16956..17045
DNA (90bp) protein (30aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6ATS4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL07549.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1326_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17114..18379
DNA (1266bp) protein (422aa)
Hemolysins and related proteins containing CBS domains n=3 Tax=Roseburia RepID=D4L448_9FIRM
Hemolysins and related proteins containing CBS domains
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CDA54431.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18416..19441)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GFU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU99289.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_1326_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19803..20987
DNA (1185bp) protein (395aa)
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000313|EMBL:CBL14390.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Cysteine desulfurase NifS n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L450_9FIRM
L1_008_000M1_scaffold_1326_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21034..21471
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold protein NifU, Clostridium type n=4 Tax=Roseburia RepID=D4KL00_9FIRM
FeS cluster assembly scaffold protein NifU, Clostridium type
FeS cluster assembly scaffold protein NifU Clostridium type {ECO:0000313|EMBL:CDA54434.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21501..22808
DNA (1308bp) protein (436aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=3 Tax=Roseburia RepID=D4KL01_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDA54435.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22896..23828
DNA (933bp) protein (311aa)
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=4 Tax=Roseburia RepID=D4KL02_9FIRM
Cysteine synthase A {ECO:0000313|EMBL:CDA54436.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24016..24693
DNA (678bp) protein (226aa)
signal peptidase I . Serine peptidase. MEROPS family S26A (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Signal peptidase I . Serine peptidase. MEROPS family S26A n=3 Tax=Roseburia RepID=D4L454_9FIRM
L1_008_000M1_scaffold_1326_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24772..25008
DNA (237bp) protein (79aa)
Cation diffusion facilitator family transporter n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KL04_9FIRM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CBL14395.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1326_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25008..25781
DNA (774bp) protein (258aa)
Cation diffusion facilitator family transporter n=3 Tax=Roseburia RepID=D4L455_9FIRM
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDA54440.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1326_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25821..26873
DNA (1053bp) protein (351aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=3 Tax=Roseburia RepID=D4KL05_9FIRM
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Response regulator receiver domain protein {ECO:0000313|EMBL:EEV01007.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_1326_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26885..29581
DNA (2697bp) protein (899aa)
Signal transduction histidine kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AR28_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CDA54443.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Signal transduction histidine kinase
L1_008_000M1_scaffold_1326_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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29574..32249
DNA (2676bp) protein (892aa)
EDD domain protein, DegV family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L458_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBL14398.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 38 in total

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