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L1_008_000M1_scaffold_1333

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1333_1
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(169..453)
DNA (285bp) protein (95aa)
Hsp90-like protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I898_9FIRM
Hsp90-like protein {ECO:0000313|EMBL:CCY33207.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_008_000M1_scaffold_1333_2
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(675..956)
DNA (282bp) protein (94aa)
Hsp90-like protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I898_9FIRM
Hsp90-like protein {ECO:0000313|EMBL:CCY33207.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L1_008_000M1_scaffold_1333_3
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1418..2617
DNA (1200bp) protein (400aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AJ18_9CLOT
Malic enzyme {ECO:0000313|EMBL:CCX41829.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
L1_008_000M1_scaffold_1333_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(2705..4132)
DNA (1428bp) protein (476aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQM4_9FIRM
cobyrinic acid a,c-diamide synthase
L1_008_000M1_scaffold_1333_5
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4153..6276)
DNA (2124bp) protein (708aa)
precorrin-6x reductase (EC:2.1.1.132)
Precorrin-6Y C(5 15)-methyltransferase n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPN8_9FIRM
Precorrin-6Y C(5 15)-methyltransferase {ECO:0000313|EMBL:CDE52622.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L1_008_000M1_scaffold_1333_6
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

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comp(6311..7066)
DNA (756bp) protein (252aa)
precorrin-3 methyltransferase (EC:2.1.1.131)
Precorrin-3 methyltransferase n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N2R1_9FIRM
Precorrin-3 methyltransferase {ECO:0000313|EMBL:CDF06388.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
L1_008_000M1_scaffold_1333_7
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(7139..8272)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A2H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD47511.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
Cobalamin biosynthesis protein CbiG
L1_008_000M1_scaffold_1333_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8256..9047)
DNA (792bp) protein (264aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Precorrin-4 C11-methyltransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYZ4_9FIRM
Precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:CDA57048.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1333_9
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(9092..10288)
DNA (1197bp) protein (399aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Firmicutes bacterium CAG:534 RepID=R7A2H4_9FIRM
cobalamin biosynthesis protein CbiD
L1_008_000M1_scaffold_1333_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10279..10923)
DNA (645bp) protein (215aa)
precorrin-8X methylmutase (EC:5.4.1.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VXR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD03533.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L1_008_000M1_scaffold_1333_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11009..11785)
DNA (777bp) protein (259aa)
Hydrogenase accessory protein HypB n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BA58_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:CDA55946.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L1_008_000M1_scaffold_1333_12
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(11852..12958)
DNA (1107bp) protein (369aa)
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZW12_9FIRM
ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components {ECO:0000313|EMBL:CDD47494.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
ferric enterobactin transport ATP-binding protein fepC
L1_008_000M1_scaffold_1333_13
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12971..13990)
DNA (1020bp) protein (340aa)
Iron compound ABC transporter permease protein putative n=1 Tax=Roseburia sp. CAG:303 RepID=R7IPQ6_9FIRM
Iron compound ABC transporter permease protein putative {ECO:0000313|EMBL:CDE52637.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_008_000M1_scaffold_1333_14
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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comp(14029..15201)
DNA (1173bp) protein (391aa)
iron ABC transporter substrate-binding protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B42F8E
Iron compound ABC transporter periplasmic iron compound-binding protein putative {ECO:0000313|EMBL:CDD47487.1}; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_008_000M1_scaffold_1333_15
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15206..16177)
DNA (972bp) protein (324aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=R9J9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS30920.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_008_000M1_scaffold_1333_16
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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comp(16214..17434)
DNA (1221bp) protein (407aa)
Cobalamin biosynthesis protein CbiK Co2+ chelatase n=3 Tax=root RepID=R6BL43_9FIRM
Cobalamin biosynthesis protein CbiK Co2+ chelatase {ECO:0000313|EMBL:CDA64968.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
anaerobic cobalt chelatase cbiK
L1_008_000M1_scaffold_1333_17
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(17945..18109)
DNA (165bp) protein (55aa)
Divergent AAA domain protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RN96_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:CDC44496.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
L1_008_000M1_scaffold_1333_18
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18259..18615)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BWX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68608.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
L1_008_000M1_scaffold_1333_19
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18709..19023)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BWX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68608.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
putative deoxyribonucleotide triphosphate pyrophosphatase
L1_008_000M1_scaffold_1333_20
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19060..20274)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1AVK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHD03810.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
L1_008_000M1_scaffold_1333_21
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(20278..22149)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86642.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1333_22
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22281..23024)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EDN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE01074.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
DeoR family transcriptional regulator, fructose operon transcriptional repressor
L1_008_000M1_scaffold_1333_23
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(23028..24674)
DNA (1647bp) protein (549aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VBA9_9FIRM
L1_008_000M1_scaffold_1333_24
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(24958..25215)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VQQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94441.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
phosphocarrier protein HPr
L1_008_000M1_scaffold_1333_25
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(25314..27254)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V887_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94443.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
L1_008_000M1_scaffold_1333_26
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(27279..28199)
DNA (921bp) protein (307aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VBB6_9FIRM
L1_008_000M1_scaffold_1333_27
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28506..29225)
DNA (720bp) protein (240aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KU95_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV05785.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L1_008_000M1_scaffold_1333_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29225..30511)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS11883.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_008_000M1_scaffold_1333_29
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30540..31523)
DNA (984bp) protein (328aa)
Carboxylesterase family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H389_9CLOT
Carboxylesterase family protein {ECO:0000313|EMBL:EJF39663.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
alpha/beta hydrolase fold-3
L1_008_000M1_scaffold_1333_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31566..32051)
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Phosphodiesterase family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2BC32_9CLOT
phosphodiesterase
Displaying items 1-30 of 35 in total

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