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L1_008_000M1_scaffold_1353

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1353_1
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(349..999)
DNA (651bp) protein (217aa)
V-type ATP synthase subunit D n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNJ0_EUBLK
hypothetical protein
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_1353_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1002..2381)
DNA (1380bp) protein (460aa)
V-type ATP synthase beta chain n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FY12_9PROT
V-type ATP synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000256|HAMAP-Rule:MF_00310}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
sodium-transporting two-sector ATPase
L1_008_000M1_scaffold_1353_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2378..4165)
DNA (1788bp) protein (596aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
V-type ATP synthase alpha chain n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNI8_EUBLK
ATP synthase
L1_008_000M1_scaffold_1353_4
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4189..4509)
DNA (321bp) protein (107aa)
ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NP63_9FIRM
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii ATCC BAA-1640.;"
L1_008_000M1_scaffold_1353_5
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4502..5383)
DNA (882bp) protein (294aa)
V-type sodium ATP synthase subunit C n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3K0_9CLOT
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_1353_6
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(5390..6001)
DNA (612bp) protein (204aa)
V-type proton ATPase subunit E n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1G7_FERPA
V-type ATP synthase subunit E
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
L1_008_000M1_scaffold_1353_7
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6030..6500)
DNA (471bp) protein (157aa)
ATP synthase subunit C n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MFQ6_9FIRM
ATP synthase subunit C {ECO:0000313|EMBL:EFV02051.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_008_000M1_scaffold_1353_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6503..8365)
DNA (1863bp) protein (621aa)
V-type ATPase 116 kDa subunit n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GNI3_EUBLK
V-type ATPase 116 kDa subunit
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_1353_9
unknown

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comp(8393..8692)
DNA (300bp) protein (100aa)
hypothetical protein
L1_008_000M1_scaffold_1353_10
unknown

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comp(8807..8947)
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000M1_scaffold_1353_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8935..9852)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IBP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61106.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
lysophospholipase
L1_008_000M1_scaffold_1353_12
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10538..11461)
DNA (924bp) protein (308aa)
Band7 family protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZD7_CLOA9
hypothetical protein
Band7 family protein {ECO:0000313|EMBL:AFS77736.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
L1_008_000M1_scaffold_1353_13
Prevotella pallens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11498..11938)
DNA (441bp) protein (147aa)
Membrane protein implicated in regulation of membrane protease activity n=1 Tax=Prevotella pallens ATCC 700821 RepID=F9DGZ3_9BACT
Membrane protein implicated in regulation of membrane protease activity {ECO:0000313|EMBL:EGQ19651.1}; TaxID=997353 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella pallens ATCC 700821.;"
nodulation efficiency protein NfeD
L1_008_000M1_scaffold_1353_14
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12005..13198)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6T1Q0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC61656.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L1_008_000M1_scaffold_1353_15
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13330..15225
DNA (1896bp) protein (632aa)
UvrABC system protein C n=7 Tax=Clostridium thermocellum RepID=UVRC_CLOTH
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_1353_16
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15225..15983
DNA (759bp) protein (253aa)
Putative phosphoesterase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PX81_CLOSD
Serine/threonine protein phosphatase {ECO:0000313|EMBL:KJF26661.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
putative phosphoesterase
L1_008_000M1_scaffold_1353_17
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15967..16932)
DNA (966bp) protein (322aa)
diacylglycerol kinase (EC:2.7.1.107)
Diacylglycerol kinase n=5 Tax=Clostridiales RepID=D4MWA7_9FIRM
Diacylglycerol kinase catalytic domain-containing protein {ECO:0000313|EMBL:CDA31669.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1353_18
unknown

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comp(16947..18599)
DNA (1653bp) protein (551aa)

This feature has no annotations

L1_008_000M1_scaffold_1353_19
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18638..20380)
DNA (1743bp) protein (581aa)
phospholipase n=1 Tax=Clostridium arbusti RepID=UPI000287FA72
Uncharacterized protein {ECO:0000313|EMBL:CCX57706.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
phospholipase D/transphosphatidylase
L1_008_000M1_scaffold_1353_20
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20438..21340)
DNA (903bp) protein (301aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HNV9_9CLOT
L1_008_000M1_scaffold_1353_21
Staphylococcus massiliensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21337..21801)
DNA (465bp) protein (155aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1229783 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus massiliensis S46.;"
50S rRNA methyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288CF2F
hypothetical protein
L1_008_000M1_scaffold_1353_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21798..22586)
DNA (789bp) protein (263aa)
Metal-dependent hydrolase, beta-lactamase superfamily I n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LUF1_CLOCD
beta-lactamase
Metal-dependent hydrolase, beta-lactamase superfamily I {ECO:0000313|EMBL:AEV70599.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_1353_23
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22589..23866)
DNA (1278bp) protein (426aa)
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Clostridium thermocellum RepID=A3DHV1_CLOTH
L1_008_000M1_scaffold_1353_24
unknown

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comp(24159..24599)
DNA (441bp) protein (147aa)

This feature has no annotations

L1_008_000M1_scaffold_1353_25
unknown

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comp(24574..24753)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_000M1_scaffold_1353_26
unknown

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comp(24834..25568)
DNA (735bp) protein (245aa)

This feature has no annotations

L1_008_000M1_scaffold_1353_27
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25673..27268)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZQ3_CLOCD
peptide chain release factor 3 (bRF-3)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_1353_28
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27312..28967)
DNA (1656bp) protein (552aa)
Dehydrogenase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQJ3_CLOSH
dehydrogenase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AGC68656.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L1_008_000M1_scaffold_1353_29
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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29183..30040
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE71300.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
HipA-like C-terminal domain.
L1_008_000M1_scaffold_1353_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30052..30951
DNA (900bp) protein (300aa)
Site-specific recombinases, DNA invertase Pin homologs n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6R4_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Site-specific recombinases, DNA invertase Pin homologs {ECO:0000313|EMBL:CBL26926.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 44 in total

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