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L1_008_000M1_scaffold_1364

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1364_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(102..749)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T429_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97474.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_1364_2
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(746..1162)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KUJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47172.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L1_008_000M1_scaffold_1364_3
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1510..2637)
DNA (1128bp) protein (376aa)
Transposase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q899Z6_CLOTE
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AHM56225.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
L1_008_000M1_scaffold_1364_4
unknown

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comp(3032..3214)
DNA (183bp) protein (61aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3352..5025)
DNA (1674bp) protein (558aa)
Putative listeria/Bacterioides repeat-containing domain protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BV68_9FIRM
Putative listeria/Bacterioides repeat-containing domain protein {ECO:0000313|EMBL:CDA57137.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Listeria/Bacterioides repeat
L1_008_000M1_scaffold_1364_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5175..5765)
DNA (591bp) protein (197aa)
Listeria-Bacteroides repeat domain (List_Bact_rpt) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1T0_9FIRM
Listeria-Bacteroides repeat domain (List_Bact_rpt).
Listeria-Bacteroides repeat domain (List_Bact_rpt) {ECO:0000313|EMBL:CBL13570.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1364_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5768..6253)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1S9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13569.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1364_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6610..6945)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T197_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96166.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_1364_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7009..8664)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6B3K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA55614.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_1364_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8726..9796)
DNA (1071bp) protein (357aa)
Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis n=2 Tax=Roseburia intestinalis RepID=D4KV45_9FIRM
Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis
Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis {ECO:0000313|EMBL:CBL11235.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1364_11

Not on your lists

comp(9923..10156)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=root RepID=K1RLC7_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKC44364.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_1364_12
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10104..11513)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S4V0_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL36432.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_008_000M1_scaffold_1364_13
unknown

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comp(11607..12038)
DNA (432bp) protein (144aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12232..13566)
DNA (1335bp) protein (445aa)
S1 RNA binding domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYJ7_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EDM98496.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_008_000M1_scaffold_1364_15
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13926..15275)
DNA (1350bp) protein (450aa)
Initiator RepB protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QX81_9FIRM
Initiator RepB protein {ECO:0000313|EMBL:CDF42056.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L1_008_000M1_scaffold_1364_16
unknown

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comp(15823..16041)
DNA (219bp) protein (73aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16458..19070)
DNA (2613bp) protein (871aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BM05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ45257.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
TraG protein
L1_008_000M1_scaffold_1364_18
unknown

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comp(19091..20314)
DNA (1224bp) protein (408aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_19
unknown

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comp(20659..21285)
DNA (627bp) protein (209aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21662..24265)
DNA (2604bp) protein (868aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M6Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66613.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_008_000M1_scaffold_1364_21
unknown

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24409..24615
DNA (207bp) protein (69aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_22
unknown

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comp(24823..25275)
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_23
unknown

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comp(25371..26075)
DNA (705bp) protein (235aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_24
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26251..28008)
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B459B1
Uncharacterized protein {ECO:0000313|EMBL:CDP50709.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
L1_008_000M1_scaffold_1364_25
unknown

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comp(28305..30398)
DNA (2094bp) protein (698aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_26
unknown

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comp(30512..30958)
DNA (447bp) protein (149aa)

This feature has no annotations

L1_008_000M1_scaffold_1364_27
Malassezia sympodialis, Malassezia, Malasseziales, Malasseziomycetes, Basidiomycota, Fungi

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comp(31154..31858)
DNA (705bp) protein (235aa)
PREDICTED: hypothetical protein LOC100763491 n=1 Tax=Cricetulus griseus RepID=UPI00022F4D10
Genomic scaffold, msy_sf_5 {ECO:0000313|EMBL:CCU98573.1}; TaxID=1230383 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia.;" source="Malassezia sympodialis (strain ATCC 42132) (Atopic eczema-associated; yeast).;"
L1_008_000M1_scaffold_1364_28
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31905..32936)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S4N5_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL36367.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L1_008_000M1_scaffold_1364_29
Eggerthella sp. HGA1, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33318..34148
DNA (831bp) protein (277aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Eggerthella sp. HGA1 RepID=F0HRC8_9ACTN
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EGC88179.1}; TaxID=910311 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. HGA1.;"
ATPases involved in chromosome partitioning
L1_008_000M1_scaffold_1364_30
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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34148..35371
DNA (1224bp) protein (408aa)
Putative chromosome-partitioning protein parB n=1 Tax=Bacteroidales bacterium CF RepID=U5Q755_9BACT
hypothetical protein
Putative chromosome-partitioning protein parB {ECO:0000313|EMBL:AGY53190.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
Displaying items 1-30 of 36 in total

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