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L1_008_000M1_scaffold_1365

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1365_1
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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913..1236
DNA (324bp) protein (108aa)
Transcriptional regulator, ArsR family n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ99_9BACT
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CBK65111.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_1365_2
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1289..1528
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI0002FC2319
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65110.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_1365_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1535..1957
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ97_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65109.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_1365_4
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1960..2667
DNA (708bp) protein (236aa)
Cytochrome c biogenesis protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ96_9BACT
Cytochrome c biogenesis protein
Cytochrome c biogenesis protein {ECO:0000313|EMBL:CBK65108.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_1365_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2672..3640
DNA (969bp) protein (323aa)
Predicted permeases n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ95_9BACT
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBK65107.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_1365_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3946..4446
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=root RepID=B0MYD3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63513.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Plasmid pRiA4b ORF-3-like protein
L1_008_000M1_scaffold_1365_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4427..5350
DNA (924bp) protein (308aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Alistipes onderdonkii RepID=UPI00037E9299
L1_008_000M1_scaffold_1365_8
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5836..7413)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FLQ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB09906.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
hypothetical protein
L1_008_000M1_scaffold_1365_9
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7430..8602)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00036013B4
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CEA15212.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
L1_008_000M1_scaffold_1365_10
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8599..10632)
DNA (2034bp) protein (678aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:831 RepID=R5ID56_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15213.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
L1_008_000M1_scaffold_1365_11
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10738..12393)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QWR6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38002.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein-transmembrane region and signal peptide prediction
L1_008_000M1_scaffold_1365_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13089..14459
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035CC711
Uncharacterized protein {ECO:0000313|EMBL:CDD25565.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_1365_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14496..15662
DNA (1167bp) protein (389aa)
Imelysin n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2S3_9BACT
Imelysin {ECO:0000313|EMBL:CDD25564.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
peptidase M75
L1_008_000M1_scaffold_1365_14
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15756..17411
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XPH1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF13021.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L1_008_000M1_scaffold_1365_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17479..19662
DNA (2184bp) protein (728aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003724873
Cytochrome c-type biogenesis protein CcsB {ECO:0000313|EMBL:CDD25562.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cytochrome C biogenesis protein
L1_008_000M1_scaffold_1365_16
unknown

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comp(19718..20170)
DNA (453bp) protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_1365_17
Prevotella pallens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20154..20792)
DNA (639bp) protein (213aa)
mobilization protein n=1 Tax=Prevotella maculosa RepID=UPI000380A5CF
Uncharacterized protein {ECO:0000313|EMBL:EGQ14785.1}; TaxID=997353 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella pallens ATCC 700821.;"
hypothetical protein
L1_008_000M1_scaffold_1365_18
Prevotella marshii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20868..21158)
DNA (291bp) protein (97aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NPA7_9BACT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFM03022.1}; TaxID=862515 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella marshii DSM 16973 = JCM 13450.;"
relaxase/mobilization nuclease
L1_008_000M1_scaffold_1365_19
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21176..21505)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Porphyromonas cansulci JCM 13913 RepID=S4NAR2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:GAD07254.1}; TaxID=1305618 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cansulci JCM 13913.;"
hypothetical protein
L1_008_000M1_scaffold_1365_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21655..22629)
DNA (975bp) protein (325aa)
mobilization protein n=1 Tax=Alistipes senegalensis RepID=UPI00037E9B7F
DNA primase
DNA primase {ECO:0000313|EMBL:AFL78544.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_1365_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22813..24033)
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI000363D227
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFR58311.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L1_008_000M1_scaffold_1365_22
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24023..24352)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00036C3CC7
Uncharacterized protein {ECO:0000313|EMBL:CCZ95910.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L1_008_000M1_scaffold_1365_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(24470..25207)
DNA (738bp) protein (246aa)
Uncharacterized protein id=2555039 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
L1_008_000M1_scaffold_1365_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(25228..26628)
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E079C7
Integrase IntN1
Tax=GWC2_Bacteroidetes_46_850_curated
L1_008_000M1_scaffold_1365_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(26955..27890)
DNA (936bp) protein (312aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO44735.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
L1_008_000M1_scaffold_1365_26
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

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28045..29505
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZS92_ANACC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ61210.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
L1_008_000M1_scaffold_1365_27
Galleria mellonella, Galleria, Lepidoptera, Neoptera, Arthropoda, Metazoa

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29502..29822
DNA (321bp) protein (107aa)
Silk sericin MG-2 n=1 Tax=Galleria mellonella RepID=R9S1U8_GALME
Silk sericin MG-2 {ECO:0000313|EMBL:AGN03941.1}; TaxID=7137 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Pyralidae; Galleriinae; Galleria.;" source="Galleria mellonella (Greater wax moth).;"
translation initiation factor IF-2
L1_008_000M1_scaffold_1365_28
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29995..31647
DNA (1653bp) protein (551aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Transcription termination factor Rho n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YR09_ALIFI
transcription termination factor Rho
L1_008_000M1_scaffold_1365_29
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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31659..32429
DNA (771bp) protein (257aa)
S1/P1 Nuclease n=1 Tax=Alistipes sp. HGB5 RepID=E4MBU0_9BACT
S1/P1 Nuclease {ECO:0000313|EMBL:EFR57609.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
S1/P1 Nuclease
L1_008_000M1_scaffold_1365_30
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(33176..35086)
DNA (1911bp) protein (637aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
long-chain fatty acid--CoA ligase n=1 Tax=Alistipes senegalensis RepID=UPI0002E49362
AMP-binding enzyme {ECO:0000313|EMBL:CDC96968.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Displaying items 1-30 of 36 in total

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