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L1_008_000M1_scaffold_1373

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1373_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..275)
DNA (273bp) protein (91aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GSB2_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCY97116.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_1373_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(272..1216)
DNA (945bp) protein (315aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZE0_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCY97115.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_1373_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1349..3313)
DNA (1965bp) protein (655aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97114.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1373_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3324..4910)
DNA (1587bp) protein (529aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N092_9FIRM
ABC-type dipeptide transport system periplasmic component {ECO:0000313|EMBL:CCY97113.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type dipeptide transport system, periplasmic component
L1_008_000M1_scaffold_1373_5
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5004..5921)
DNA (918bp) protein (306aa)
ABC transporter, permease protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CWR6_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERI89010.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
putative oligopeptide ABC transporter permease protein
L1_008_000M1_scaffold_1373_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5915..6874)
DNA (960bp) protein (320aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease components n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIF6_9FIRM
ABC-type dipeptide/oligopeptide/nickel transport systems permease components {ECO:0000313|EMBL:CCY97111.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_1373_7
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7192..8109)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2E491_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI89007.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Transcriptional regulator
L1_008_000M1_scaffold_1373_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8114..10138)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97109.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted deacylase
L1_008_000M1_scaffold_1373_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10132..10515)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97109.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_1373_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10889..11524
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N088_9FIRM
L1_008_000M1_scaffold_1373_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11582..12115
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJ40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97107.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1373_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12201..14012)
DNA (1812bp) protein (604aa)
Alcohol acetyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIF4_9FIRM
Alcohol acetyltransferase {ECO:0000313|EMBL:CCY97106.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Alcohol acetyltransferase.
L1_008_000M1_scaffold_1373_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14104..15087)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97105.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Esterase/lipase
L1_008_000M1_scaffold_1373_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15376..16182)
DNA (807bp) protein (269aa)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase (EC:3.2.2.- 4.2.99.18)
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5C6_9FIRM
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase {ECO:0000313|EMBL:CCY97104.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1373_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16310..16753)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N084_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97103.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1373_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17075..17353
DNA (279bp) protein (93aa)
Uncharacterised protein family (UPF0150) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJ37_9FIRM
Uncharacterised protein family (UPF0150) {ECO:0000313|EMBL:CCY97102.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uncharacterised protein family (UPF0150).
L1_008_000M1_scaffold_1373_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17495..17965)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97101.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator, MarR family
L1_008_000M1_scaffold_1373_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18071..19840)
DNA (1770bp) protein (590aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|SAAS:SAAS00057375}; EC=6.4.1.- {ECO:0000256|SAAS:SAAS00275530};; EC=6.4.1.2 {ECO:0000256|SAAS:SAAS00057486};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-CoA carboxylase carboxyltransferase subunit alpha n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZD0_9FIRM
L1_008_000M1_scaffold_1373_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19830..21194)
DNA (1365bp) protein (455aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.2)
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5C2_9FIRM
Acetyl-CoA carboxylase biotin carboxylase {ECO:0000313|EMBL:CCY97099.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1373_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21204..21632)
DNA (429bp) protein (143aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; Beta-hydroxyacyl-ACP dehydratase {ECO:0000256|HAMAP-Rule:MF_00406}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N079_9FIRM
L1_008_000M1_scaffold_1373_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21741..22343)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GWM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97097.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1373_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22348..23589)
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIE6_9FIRM
L1_008_000M1_scaffold_1373_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23622..24362)
DNA (741bp) protein (247aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZC7_9FIRM
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CCY97095.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1373_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24379..25299)
DNA (921bp) protein (307aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5B7_9FIRM
L1_008_000M1_scaffold_1373_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25304..26248)
DNA (945bp) protein (315aa)
putative enoyl-(acyl-carrier-protein) reductase II (EC:1.3.1.-)
Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N076_9FIRM
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CCY97093.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1373_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26350..27315)
DNA (966bp) protein (322aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41 2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJ27_9FIRM
L1_008_000M1_scaffold_1373_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27693..28406
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97091.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1373_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28437..28709)
DNA (273bp) protein (91aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZC5_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY97090.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted membrane protein
L1_008_000M1_scaffold_1373_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28766..29332)
DNA (567bp) protein (189aa)
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5B3_9FIRM
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis {ECO:0000313|EMBL:CCY97089.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L1_008_000M1_scaffold_1373_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29355..29918)
DNA (564bp) protein (188aa)
Acetyltransferases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N071_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CCY97088.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Acetyltransferases
Displaying items 1-30 of 71 in total

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