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L1_008_000M1_scaffold_1387

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1387_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..324
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SZW8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95452.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_1387_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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466..624
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SZW9_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN95453.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_1387_3
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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808..1569
DNA (762bp) protein (254aa)
Type IV secretion system protein VirD4 n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M478_9FIRM
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:EOS65770.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
Type IV secretory pathway, VirD4 components
L1_008_000M1_scaffold_1387_4
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1550..1885
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8H6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL15921.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_1387_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1949..2785
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QSP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC38890.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_1387_6
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2900..3127
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MX92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75301.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L1_008_000M1_scaffold_1387_7
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3118..3489
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DBP6_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00225.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L1_008_000M1_scaffold_1387_8
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3473..5812
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DUR8_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00224.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Domain of unknown function DUF87.
L1_008_000M1_scaffold_1387_9
unknown

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5838..6152
DNA (315bp) protein (105aa)

This feature has no annotations

L1_008_000M1_scaffold_1387_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6152..7852
DNA (1701bp) protein (567aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8I1_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL15926.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L1_008_000M1_scaffold_1387_11
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7958..8272)
DNA (315bp) protein (105aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6ERM0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA92572.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_1387_12
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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8393..8878
DNA (486bp) protein (162aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ETB9_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX91852.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_008_000M1_scaffold_1387_13
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9096..9302
DNA (207bp) protein (69aa)
Predicted transcriptional regulator n=1 Tax=Clostridium nexile CAG:348 RepID=R6PP47_9CLOT
Predicted transcriptional regulator {ECO:0000313|EMBL:CDC22594.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted transcriptional regulator
L1_008_000M1_scaffold_1387_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9351..10106
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27728.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
helicase/SNF2 domain-containing protein
L1_008_000M1_scaffold_1387_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10117..10626
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LX40_9FIRM
Conjugative transposon protein {ECO:0000313|EMBL:CEP94809.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L1_008_000M1_scaffold_1387_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10623..11288
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HP87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27727.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L1_008_000M1_scaffold_1387_17
unknown

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11285..11764
DNA (480bp) protein (160aa)

This feature has no annotations

L1_008_000M1_scaffold_1387_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11802..12638
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27723.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
type III restriction-modification system, restriction endonuclease subunit
L1_008_000M1_scaffold_1387_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12692..13351
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H8P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU95753.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_1387_20
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13429..18237
DNA (4809bp) protein (1603aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EQ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04745.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
RecQ familyATP-dependent DNA helicase
L1_008_000M1_scaffold_1387_21
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18266..19303
DNA (1038bp) protein (346aa)
GroES-like protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LG89_9FIRM
GroES-like protein {ECO:0000313|EMBL:EFY04208.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
putative zinc-binding alcohol dehydrogenase
L1_008_000M1_scaffold_1387_22
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19318..20157
DNA (840bp) protein (280aa)
Esterase/lipase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AF68_9CLOT
Esterase/lipase {ECO:0000313|EMBL:CCX41383.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
esterase/lipase
L1_008_000M1_scaffold_1387_23
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

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20214..21023
DNA (810bp) protein (270aa)
UvrD/REP helicase n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5JCB6_9FIRM
UvrD/REP helicase {ECO:0000313|EMBL:CCY46621.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
hypothetical protein
L1_008_000M1_scaffold_1387_24
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21030..21473
DNA (444bp) protein (148aa)
Acetyltransferases n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HHJ7_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CCY29008.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Acetyltransferases
L1_008_000M1_scaffold_1387_25
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21889..22866
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22595.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L1_008_000M1_scaffold_1387_26
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22884..23453
DNA (570bp) protein (190aa)
3-Methyladenine DNA glycosylase n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V8D4_CLOSS
Tag; 3-Methyladenine DNA glycosylase
3-Methyladenine DNA glycosylase {ECO:0000313|EMBL:BAK46394.1}; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
L1_008_000M1_scaffold_1387_27
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

23619..24020
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86642.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1387_28
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

24017..25342
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MLE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86642.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1387_29
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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25463..25948
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PRZ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJF39547.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_008_000M1_scaffold_1387_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25852..27405)
DNA (1554bp) protein (518aa)
Recombinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GPC8_9FIRM
Recombinase {ECO:0000313|EMBL:CDB26280.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
recombinase
Displaying items 1-30 of 40 in total

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