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L1_008_000M1_scaffold_1406

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1406_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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388..1590
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77518.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
AhpC/TSA family.
L1_008_000M1_scaffold_1406_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1591..1755
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77517.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1406_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1756..2670
DNA (915bp) protein (305aa)
4Fe-4S ferredoxin n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003107E4E
Uncharacterized protein {ECO:0000313|EMBL:EES77516.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
iron-sulfur binding protein
L1_008_000M1_scaffold_1406_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2793..3731
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CR52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79928.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
AraC-type DNA-binding domain-containing proteins
L1_008_000M1_scaffold_1406_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3682..4248
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77514.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_1406_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4576..5865
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79930.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_1406_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6063..6962
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JCL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79932.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
lactose transport system (permease)
L1_008_000M1_scaffold_1406_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6955..7782
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77511.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_1406_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8109..11054
DNA (2946bp) protein (982aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JCL6_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EES77510.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_1406_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11051..11176
DNA (126bp) protein (42aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPR6_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDD79936.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_1406_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11465..12505)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJ61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58481.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Transcriptional regulators
L1_008_000M1_scaffold_1406_12
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12761..13336
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32222.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Chromate transport protein ChrA
L1_008_000M1_scaffold_1406_13
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13333..13902
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32223.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Chromate transport protein ChrA
L1_008_000M1_scaffold_1406_14
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14297..15463
DNA (1167bp) protein (389aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
6-phosphofructokinase n=1 Tax=Coprococcus catus GD/7 RepID=D4J6Z6_9FIRM
L1_008_000M1_scaffold_1406_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15518..16300
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97890.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L1_008_000M1_scaffold_1406_16
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16279..17070
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76303.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L1_008_000M1_scaffold_1406_17
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17164..18174
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30228.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L1_008_000M1_scaffold_1406_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18272..19297
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IA09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61898.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LacI family transcriptional regulator
L1_008_000M1_scaffold_1406_19
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19350..20201
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolase (EC:4.1.2.40)
Ketose-bisphosphate aldolase n=2 Tax=Clostridium RepID=D3AAW1_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCZ61613.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L1_008_000M1_scaffold_1406_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20262..21323
DNA (1062bp) protein (354aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
SIS domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AAW2_9CLOT
SIS domain protein {ECO:0000313|EMBL:EFD01043.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_008_000M1_scaffold_1406_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21439..22497)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6PII0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09557.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Transcriptional regulators
L1_008_000M1_scaffold_1406_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22788..23639
DNA (852bp) protein (284aa)
UPF0272 protein BN806_01385 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFT4_9FIRM
UPF0272 protein BN806_01385 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00299
L1_008_000M1_scaffold_1406_23
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23766..24587
DNA (822bp) protein (274aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBU0_BLAHA
6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase
L1_008_000M1_scaffold_1406_24
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24624..25772
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBT9_BLAHA
L1_008_000M1_scaffold_1406_25
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25785..26939
DNA (1155bp) protein (385aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBK80128.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBK80128.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Fructose-bisphosphate aldolase n=1 Tax=Coprococcus catus GD/7 RepID=D4J707_9FIRM
L1_008_000M1_scaffold_1406_26
Catellicoccus marimammalium, Catellicoccus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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26957..27670
DNA (714bp) protein (238aa)
Transport protein n=1 Tax=Catellicoccus marimammalium M35/04/3 RepID=K8Z7E5_9ENTE
Transport protein {ECO:0000313|EMBL:EKU26934.1}; TaxID=1234409 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Catellicoccus.;" source="Catellicoccus marimammalium M35/04/3.;"
hypothetical protein
L1_008_000M1_scaffold_1406_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27667..28605
DNA (939bp) protein (313aa)
Triosephosphate isomerase (EC:5.3.1.1)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30216.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L1_008_000M1_scaffold_1406_28
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28632..30119
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93465.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Uncharacterized conserved protein (DUF2088).
L1_008_000M1_scaffold_1406_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30256..30795
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30233.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L1_008_000M1_scaffold_1406_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30786..31400
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FW73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93237.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
uridine kinase
Displaying items 1-30 of 45 in total

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