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L1_008_000M1_scaffold_1414

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1414_1
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(292..813)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YK40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62595.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Helix-turn-helix.
L1_008_000M1_scaffold_1414_2
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1148..1336
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZF40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62594.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L1_008_000M1_scaffold_1414_3
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1349..2437
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YDF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62593.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_1414_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2437..2784
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YXV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62592.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L1_008_000M1_scaffold_1414_5
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2996..3580
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YEG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62591.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
DNA primase (bacterial type)
L1_008_000M1_scaffold_1414_6
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3587..4951
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YK33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62590.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Predicted P-loop ATPase and inactivated derivatives
L1_008_000M1_scaffold_1414_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5350..6897
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZF33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62589.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
MobA/MobL family.
L1_008_000M1_scaffold_1414_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6970..7224)
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58271.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Helix-turn-helix.
L1_008_000M1_scaffold_1414_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7333..7767
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=D5Q497_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFH07417.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
hypothetical protein
L1_008_000M1_scaffold_1414_10
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7898..9046
DNA (1149bp) protein (383aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
Cytosine-specific methyltransferase n=1 Tax=Clostridium sp. CAG:43 RepID=R7AIY8_9CLOT
modification methylase
L1_008_000M1_scaffold_1414_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9046..10227
DNA (1182bp) protein (394aa)
Restriction endonuclease n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQT1_CLOSY
Restriction endonuclease {ECO:0000313|EMBL:EGA92891.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
putative type II restriction enzyme
L1_008_000M1_scaffold_1414_12
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10229..10678
DNA (450bp) protein (150aa)
Patch repair protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7B3M2_9CLOT
Patch repair protein {ECO:0000313|EMBL:CDD58347.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
DNA mismatch endonuclease Vsr
L1_008_000M1_scaffold_1414_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10694..12472
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN09_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41955.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000M1_scaffold_1414_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12494..13603
DNA (1110bp) protein (370aa)
hgiDIIM: modification methylase HgiDII (EC:2.1.1.37)
HgiDIIM: modification methylase HgiDII {ECO:0000313|EMBL:AGX41956.1}; EC=2.1.1.37 {ECO:0000313|EMBL:AGX41956.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
HgiDIIM: modification methylase HgiDII n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQM1_CLOSA
L1_008_000M1_scaffold_1414_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13873..15015
DNA (1143bp) protein (381aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9QZ75_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL04326.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L1_008_000M1_scaffold_1414_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15415..15606
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0L5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27575.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15613..16302
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0L6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27576.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_18
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16299..16547
DNA (249bp) protein (83aa)
Restriction endonuclease, type II, LlaJI n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SLN1_CLOC7
Restriction endonuclease, type II, LlaJI
Restriction endonuclease, type II, LlaJI {ECO:0000313|EMBL:ADL53668.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L1_008_000M1_scaffold_1414_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16563..16661
DNA (99bp) protein (33aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0L7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27577.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16740..17153
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T110_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96004.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_1414_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17225..17623
DNA (399bp) protein (133aa)
Uncharacterised protein family (UPF0158) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0L9_9FIRM
Uncharacterised protein family (UPF0158).
Uncharacterised protein family (UPF0158) {ECO:0000313|EMBL:CBL27579.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17640..18638
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T112_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96006.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_1414_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18741..22208
DNA (3468bp) protein (1156aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T113_ROSHA
Uncharacterized protein {ECO:0000313|EMBL:AEN96007.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
hypothetical protein
L1_008_000M1_scaffold_1414_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22198..23580
DNA (1383bp) protein (461aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27580.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23540..24253
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27580.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_26
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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24538..24801
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY78625.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L1_008_000M1_scaffold_1414_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24792..25088
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27581.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_28
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25293..25535
DNA (243bp) protein (81aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M2_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL27582.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25528..27315
DNA (1788bp) protein (596aa)
Cytosine-specific methyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M3_9FIRM
DNA-methyltransferase (dcm)
DNA-methyltransferase (Dcm) {ECO:0000313|EMBL:CBL27583.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1414_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27320..29479
DNA (2160bp) protein (720aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0M4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL27584.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 35 in total

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