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L1_008_000M1_scaffold_1418

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1418_1
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..460
DNA (459bp) protein (153aa)
Eco57I restriction endonuclease n=3 Tax=Lachnospiraceae RepID=E5VIA6_9FIRM
Eco57I restriction endonuclease {ECO:0000313|EMBL:CDA31688.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted O-methyltransferase
L1_008_000M1_scaffold_1418_2
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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596..781
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=L1PUM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA31689.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_3
unknown

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759..908
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5YXW4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38119.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1418_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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905..1630
DNA (726bp) protein (242aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=L1PTX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY19184.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_1418_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1898..2710)
DNA (813bp) protein (271aa)
Haloacid dehalogenase-like hydrolase n=3 Tax=Lachnospiraceae RepID=E5VIA4_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EKY19183.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_1418_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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3083..3358
DNA (276bp) protein (92aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P1S6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31694.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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3554..4285
DNA (732bp) protein (244aa)
4Fe-4S binding domain n=5 Tax=Clostridiales RepID=D4MZS8_9FIRM
4Fe-4S binding domain.
4Fe-4S binding domain-containing protein {ECO:0000313|EMBL:CDA31695.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4462..5421
DNA (960bp) protein (320aa)
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Ribosomal protein L11 methyltransferase n=5 Tax=Clostridiales RepID=D4MZS9_9FIRM
L1_008_000M1_scaffold_1418_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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5425..6162
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=2 Tax=Clostridiales RepID=B0P1S3_9CLOT
L1_008_000M1_scaffold_1418_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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6177..7319
DNA (1143bp) protein (381aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes n=4 Tax=Clostridiales RepID=D4MZT1_9FIRM
Aminotransferase class-V {ECO:0000313|EMBL:CDA31698.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_11
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7363..8541
DNA (1179bp) protein (393aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Probable tRNA sulfurtransferase n=3 Tax=Clostridiales RepID=B0P1S1_9CLOT
thiazole biosynthesis/tRNA modification protein ThiI
L1_008_000M1_scaffold_1418_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8525..8758)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5YXX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17405.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
PTS HPr component phosphorylation site.
L1_008_000M1_scaffold_1418_13
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8833..10155
DNA (1323bp) protein (441aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=2 Tax=Lachnospiraceae RepID=E5VI96_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EFV17404.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1418_14
unknown

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10240..10494
DNA (255bp) protein (85aa)
Uncharacterized protein conserved in bacteria n=5 Tax=Clostridiales RepID=D4MZT5_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL38130.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1418_15
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10508..10927
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1R7_9CLOT
conserved hypothetical protein TIGR00250
L1_008_000M1_scaffold_1418_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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10940..11215
DNA (276bp) protein (92aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P1R6_9CLOT
Protein of unknown function (DUF1292).
Uncharacterized protein {ECO:0000313|EMBL:CDA31704.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_17
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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11275..13053
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YXX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA31705.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
beta-lactamase domain-containing protein
L1_008_000M1_scaffold_1418_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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13055..13456
DNA (402bp) protein (134aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P1R4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31706.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_19
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13453..14115
DNA (663bp) protein (221aa)
Predicted O-methyltransferase n=4 Tax=Clostridiales RepID=D4MZT9_9FIRM
Predicted O-methyltransferase
Methyltransferase domain-containing protein {ECO:0000313|EMBL:EFV17398.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1418_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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14102..15343
DNA (1242bp) protein (414aa)
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PTY0_9FIRM
Peptidase, U32 family {ECO:0000313|EMBL:EKY19168.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1418_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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15441..16064
DNA (624bp) protein (208aa)
RNA polymerase sigma factor n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PUW4_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
RpoD; sporulation sigma factor SigK
L1_008_000M1_scaffold_1418_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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16282..17025
DNA (744bp) protein (248aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P1R0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31710.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1418_23
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17042..17734
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P1Q9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS21918.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1418_24
unknown

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17750..19117
DNA (1368bp) protein (456aa)
Amidohydrolase n=2 Tax=Clostridiales RepID=D4MZU3_9FIRM
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:CBL38138.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1418_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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19245..20885
DNA (1641bp) protein (547aa)
Purine catabolism regulatory protein-like family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PTX5_9FIRM
Purine catabolism regulatory protein-like family protein {ECO:0000313|EMBL:EKY19163.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Sugar diacid utilization regulator
L1_008_000M1_scaffold_1418_26
unknown

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comp(21133..21387)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NXQ0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38616.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1418_27
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21368..22546)
DNA (1179bp) protein (393aa)
BlaR1 peptidase M56 n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VM48_9FIRM
BlaR1 peptidase M56 {ECO:0000313|EMBL:EFV16066.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
L1_008_000M1_scaffold_1418_28
unknown

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comp(22548..22934)
DNA (387bp) protein (129aa)
Penicillinase repressor n=4 Tax=Clostridiales RepID=D4N173_9FIRM
Penicillinase repressor.
Penicillinase repressor {ECO:0000313|EMBL:CBL38618.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1418_29
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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23455..25377
DNA (1923bp) protein (641aa)
Subtilase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI79_9FIRM
Subtilase {ECO:0000313|EMBL:EFV17387.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Subtilisin-like serine proteases
L1_008_000M1_scaffold_1418_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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25400..26455
DNA (1056bp) protein (352aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0P1Q1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31719.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Displaying items 1-30 of 39 in total

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