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L1_008_000M1_scaffold_1441

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1441_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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105..1163
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJS6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10606.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1441_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1259..2548
DNA (1290bp) protein (430aa)
Amino acid carrier protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJS7_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBL10607.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1441_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2651..3523
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GDU2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDA53753.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_1441_4
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3539..5389
DNA (1851bp) protein (617aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B457_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDA53756.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_1441_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5386..7140
DNA (1755bp) protein (585aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDT9_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV00033.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_1441_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7266..7967)
DNA (702bp) protein (234aa)
Transcriptional regulator, GntR family n=3 Tax=Roseburia intestinalis RepID=D4KJT0_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL10610.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1441_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8173..9846
DNA (1674bp) protein (558aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDT7_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEV00031.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_1441_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9875..11179
DNA (1305bp) protein (435aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDT6_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:EEV00030.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methyl-accepting chemotaxis protein
L1_008_000M1_scaffold_1441_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11213..12784
DNA (1572bp) protein (524aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes n=4 Tax=Roseburia RepID=D4KJT3_9FIRM
Phosphatidylserine/phosphatidylglycerophosphate/c ardiolipin synthases and related enzymes {ECO:0000313|EMBL:CDA53763.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12961..13653
DNA (693bp) protein (231aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJT4_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL10614.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1441_11
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13744..14886)
DNA (1143bp) protein (381aa)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase (EC:2.6.1.-)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B468_9FIRM
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:CDA53766.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15019..15567)
DNA (549bp) protein (183aa)
Predicted membrane protein n=4 Tax=Roseburia RepID=D4KJT6_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CDA53767.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15857..16060)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family n=4 Tax=Roseburia RepID=D4KJT7_9FIRM
cold-shock DNA-binding protein family
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:CDA53768.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16158..16664)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AY30_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA53769.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_15
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16877..18169
DNA (1293bp) protein (431aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Aspartyl aminopeptidase (EC:3.4.11.21)
M18 family aminopeptidase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AQQ5_9FIRM
L1_008_000M1_scaffold_1441_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18179..19405
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BLM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54347.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_1441_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19570..20409
DNA (840bp) protein (280aa)
EDD domain protein, DegV family n=2 Tax=Roseburia RepID=D4KJU0_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:CBL10620.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_1441_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20485..21792
DNA (1308bp) protein (436aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:CBL10621.1}; EC=6.3.2.17 {ECO:0000313|EMBL:CBL10621.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJU1_9FIRM
L1_008_000M1_scaffold_1441_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21879..22643
DNA (765bp) protein (255aa)
Predicted membrane protein involved in D-alanine export n=2 Tax=Roseburia RepID=D4KJU2_9FIRM
Predicted membrane protein involved in D-alanine export
Predicted membrane protein involved in D-alanine export {ECO:0000313|EMBL:CDA54341.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22767..23150
DNA (384bp) protein (128aa)
Predicted membrane protein involved in D-alanine export n=2 Tax=Roseburia RepID=D4KJU2_9FIRM
Predicted membrane protein involved in D-alanine export
Predicted membrane protein involved in D-alanine export {ECO:0000313|EMBL:CDA54341.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_1441_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23173..24096
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GDS4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13150.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1441_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24293..25798
DNA (1506bp) protein (502aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B5S6_9FIRM
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:CDA54336.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_1441_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25798..26019
DNA (222bp) protein (74aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B5S6_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEV00016.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Signal transduction histidine kinase
L1_008_000M1_scaffold_1441_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26088..27437
DNA (1350bp) protein (450aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL13152.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:CBL13152.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Enolase n=2 Tax=Roseburia intestinalis RepID=D4KJU4_9FIRM
L1_008_000M1_scaffold_1441_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27502..27741
DNA (240bp) protein (80aa)
Preprotein translocase, SecG subunit n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GDS0_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EEV00014.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
preprotein translocase subunit SecG
L1_008_000M1_scaffold_1441_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27806..29944
DNA (2139bp) protein (713aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
RNAse R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0L4_9FIRM
L1_008_000M1_scaffold_1441_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30020..30487
DNA (468bp) protein (156aa)
SsrA-binding protein n=2 Tax=Roseburia intestinalis RepID=D4KJU7_9FIRM
SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_1441_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31075..31623)
DNA (549bp) protein (183aa)
Uncharacterized protein conserved in cyanobacteria n=2 Tax=Roseburia intestinalis RepID=D4KJU8_9FIRM
Uncharacterized protein conserved in cyanobacteria
Uncharacterized protein conserved in cyanobacteria {ECO:0000313|EMBL:CBL13156.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1441_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32381..32842
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0L8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13158.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_1441_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33198..34217)
DNA (1020bp) protein (340aa)
Transcriptional regulators n=3 Tax=Roseburia RepID=D4L0M0_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA54329.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Transcriptional regulators
Displaying items 1-30 of 44 in total

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