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L1_008_000M1_scaffold_1470

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1470_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(232..816)
DNA (585bp) protein (195aa)
Pentapeptide repeat protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIH5_9FIRM
Pentapeptide repeat protein {ECO:0000313|EMBL:EFB77334.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_1470_2
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(816..1679)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CSG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70241.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
ATPase
L1_008_000M1_scaffold_1470_3
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1977..3638)
DNA (1662bp) protein (554aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKU5_9FIRM
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EFB76603.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L1_008_000M1_scaffold_1470_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3655..5163)
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKU4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB76602.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_008_000M1_scaffold_1470_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5329..6648)
DNA (1320bp) protein (440aa)
Glucose/galactose-binding lipoprotein family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKU3_9FIRM
Glucose/galactose-binding lipoprotein family protein {ECO:0000313|EMBL:EFB76600.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_008_000M1_scaffold_1470_6
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7187..7561)
DNA (375bp) protein (125aa)
Transcriptional regulator, Fur family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIH7_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFB77336.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Fur family ferric uptake regulator
L1_008_000M1_scaffold_1470_7

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comp(7765..8499)
DNA (735bp) protein (245aa)
Membrane or secreted protein containing Peptidase M23 domain protein n=1 Tax=human gut metagenome RepID=K1S9E6_9ZZZZ
Membrane or secreted protein containing Peptidase M23 domain protein {ECO:0000313|EMBL:EKC50410.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Membrane proteins related to metalloendopeptidases
L1_008_000M1_scaffold_1470_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8789..9436
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB77532.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_1470_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9433..10827
DNA (1395bp) protein (465aa)
MATE efflux family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q9D8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC29649.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L1_008_000M1_scaffold_1470_10

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10840..11589
DNA (750bp) protein (250aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RS54_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC48248.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_1470_11
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11646..13061
DNA (1416bp) protein (472aa)
FAD dependent oxidoreductase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PIE5_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFB77530.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Uncharacterized FAD-dependent dehydrogenases
L1_008_000M1_scaffold_1470_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13694..15154)
DNA (1461bp) protein (487aa)
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain (EC:1.3.1.74 3.4.21.-)
Trypsin n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PRL4_9FIRM
Trypsin {ECO:0000313|EMBL:EFB74661.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_008_000M1_scaffold_1470_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15420..16301
DNA (882bp) protein (294aa)
Acetyltransferase, GNAT family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H169_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEU98340.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis
L1_008_000M1_scaffold_1470_14
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16342..17097
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6EAC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA87152.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
TraX protein.
L1_008_000M1_scaffold_1470_15
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17580..19262)
DNA (1683bp) protein (561aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP19_9FIRM
L1_008_000M1_scaffold_1470_16
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19408..19665)
DNA (258bp) protein (86aa)
ptsH1; Phosphocarrier protein HPr (EC:2.7.11.-)
Phosphocarrier, HPr family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP20_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EFB75516.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
L1_008_000M1_scaffold_1470_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(19846..20625)
DNA (780bp) protein (260aa)
HAD-superfamily hydrolase subfamily IIB n=2 Tax=root RepID=R6EJP3_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDB00085.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_1470_18

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20767..21282
DNA (516bp) protein (172aa)
Siderophore binding protein (Fragment) n=1 Tax=human gut metagenome RepID=K1S3Z2_9ZZZZ
Siderophore binding protein {ECO:0000313|EMBL:EKC55392.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L1_008_000M1_scaffold_1470_19
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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21710..23323
DNA (1614bp) protein (538aa)
Peptide chain release factor 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP14_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
bacterial peptide chain release factor 3 (bRF-3)
L1_008_000M1_scaffold_1470_20
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23467..24336
DNA (870bp) protein (290aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:EFB76203.1}; EC=2.7.4.- {ECO:0000313|EMBL:EFB76203.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNR8_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1470_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24394..25515
DNA (1122bp) protein (374aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76204.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76204.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNR9_9FIRM
epsF1; glycosyltransferase EpsF1
L1_008_000M1_scaffold_1470_22
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25512..26522
DNA (1011bp) protein (337aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76205.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76205.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS0_9FIRM
family 2 glycosyl transferase
L1_008_000M1_scaffold_1470_23

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26547..27767
DNA (1221bp) protein (407aa)
Glycosyl transferase GT4 family protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TND5_9ZZZZ
Glycosyl transferase GT4 family protein {ECO:0000313|EMBL:EKC71113.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glycosyl transferase 4
L1_008_000M1_scaffold_1470_24
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27764..29047
DNA (1284bp) protein (428aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76207.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76207.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS2_9FIRM
glycosyl transferase family 1
L1_008_000M1_scaffold_1470_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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29044..30081
DNA (1038bp) protein (346aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76208.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76208.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS3_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1470_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30096..31118
DNA (1023bp) protein (341aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76209.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76209.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS4_9FIRM
glycosyl transferase family protein
L1_008_000M1_scaffold_1470_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31140..32126
DNA (987bp) protein (329aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76210.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76210.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glycosyltransferase (EC:2.4.1.175 2.4.1.226)
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS5_9FIRM
L1_008_000M1_scaffold_1470_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32686..33921
DNA (1236bp) protein (412aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFB76211.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76211.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
glycosyltransferase (EC:2.4.1.56)
Glycosyltransferase, group 1 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS6_9FIRM
L1_008_000M1_scaffold_1470_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33897..34955
DNA (1059bp) protein (353aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFB76212.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFB76212.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNS7_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1470_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35212..36603
DNA (1392bp) protein (464aa)
Radical SAM domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PP16_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EFB75512.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
radical SAM domain-containing protein
Displaying items 1-30 of 45 in total

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