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L1_008_000M1_scaffold_1547

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1547_1
unknown

Not on your lists

comp(2..154)
DNA (153bp) protein (51aa)

This feature has no annotations

L1_008_000M1_scaffold_1547_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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261..1478
DNA (1218bp) protein (406aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAJ5_9FIRM
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL01858.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1566..1940)
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAJ4_9FIRM
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:CBL01857.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2012..3217)
DNA (1206bp) protein (402aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EDP20939.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EDP20939.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L-threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDM3_9FIRM
L1_008_000M1_scaffold_1547_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3362..4276)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20940.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_008_000M1_scaffold_1547_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4273..5034)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAJ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01855.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5036..6187)
DNA (1152bp) protein (384aa)
Uncharacterized protein involved in tellurite resistance n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAJ1_9FIRM
Uncharacterized protein involved in tellurite resistance
Uncharacterized protein involved in tellurite resistance {ECO:0000313|EMBL:CBL01854.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6231..6860)
DNA (630bp) protein (210aa)
5-bromo-4-chloroindolyl phosphate hydrolysis protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAJ0_9FIRM
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
5-bromo-4-chloroindolyl phosphate hydrolysis protein {ECO:0000313|EMBL:CBL01853.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6964..7452)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20944.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
G:T/U mismatch-specific DNA glycosylase
L1_008_000M1_scaffold_1547_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7449..8342)
DNA (894bp) protein (298aa)
HAD hydrolase, family IIB n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDN1_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDP20945.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_1547_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8481..9368)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20946.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Protein of unknown function (DUF2899).
L1_008_000M1_scaffold_1547_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9669..10439)
DNA (771bp) protein (257aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAI6_9FIRM
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
ThiF family protein {ECO:0000313|EMBL:EDP20947.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_1547_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10450..11553)
DNA (1104bp) protein (368aa)
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAI5_9FIRM
L1_008_000M1_scaffold_1547_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11622..13070)
DNA (1449bp) protein (483aa)
tRNA nucleotidyltransferase/poly(A) polymerase (EC:2.7.7.72 3.1.4.- 3.1.3.-)
tRNA nucleotidyltransferase/poly(A) polymerase {ECO:0000313|EMBL:CBL01847.1}; EC=2.7.7.21 {ECO:0000313|EMBL:CBL01847.1};; EC=2.7.7.25 {ECO:0000313|EMBL:CBL01847.1};; EC=3.1.3.- {ECO:0000313|EMBL:CBL01847.1};; EC=3.1.4.- {ECO:0000313|EMBL:CBL01847.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAI4_9FIRM
L1_008_000M1_scaffold_1547_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13067..14005)
DNA (939bp) protein (313aa)
Metal-dependent hydrolases of the beta-lactamase superfamily III (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818, ECO:0000313|EMBL:CBL01846.1};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Ribonuclease Z n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAI3_9FIRM
L1_008_000M1_scaffold_1547_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14119..14301
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20952.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_008_000M1_scaffold_1547_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14601..15551)
DNA (951bp) protein (317aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Aspartate carbamoyltransferase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDP0_9FIRM
aspartate carbamoyltransferase
L1_008_000M1_scaffold_1547_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15548..16849)
DNA (1302bp) protein (434aa)
Adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000313|EMBL:CBL01844.1};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Adenylosuccinate synthetase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAI1_9FIRM
L1_008_000M1_scaffold_1547_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17110..18021
DNA (912bp) protein (304aa)
Transcriptional regulator n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAI0_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL01843.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18167..18958)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDP4_9FIRM
Predicted membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EDP20958.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_1547_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19141..19551
DNA (411bp) protein (137aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH8_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL01841.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20016..20897)
DNA (882bp) protein (294aa)
Galactose mutarotase and related enzymes n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH7_9FIRM
Galactose mutarotase and related enzymes
Galactose mutarotase and related enzymes {ECO:0000313|EMBL:CBL01840.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20941..21099)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01839.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21175..21765)
DNA (591bp) protein (197aa)
D-altronate dehydratase (EC:4.2.1.7)
D-altronate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH5_9FIRM
SAF domain protein {ECO:0000313|EMBL:EDP20963.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_1547_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21780..22052)
DNA (273bp) protein (91aa)
D-altronate dehydratase (EC:4.2.1.7)
D-altronate dehydratase {ECO:0000313|EMBL:CBL01838.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CBL01838.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
D-altronate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH5_9FIRM
L1_008_000M1_scaffold_1547_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22007..22588)
DNA (582bp) protein (194aa)
D-altronate dehydratase (EC:4.2.1.7)
D-altronate dehydratase {ECO:0000313|EMBL:CBL01838.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CBL01838.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
D-altronate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH5_9FIRM
L1_008_000M1_scaffold_1547_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22673..24187)
DNA (1515bp) protein (505aa)
tagaturonate reductase (EC:1.1.1.58)
Mannitol dehydrogenase domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDQ2_9FIRM
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EDP20964.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_1547_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24509..25942
DNA (1434bp) protein (478aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
D-glucuronate isomerase (EC:5.3.1.12)
Uronate isomerase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDQ4_9FIRM
L1_008_000M1_scaffold_1547_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26189..27073
DNA (885bp) protein (295aa)
Uncharacterized conserved protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAH2_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL01835.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_1547_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27259..28917
DNA (1659bp) protein (553aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Glutaminyl-tRNA synthetase n=2 Tax=Faecalibacterium prausnitzii RepID=D4KAH1_9FIRM
Displaying items 1-30 of 43 in total

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