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L1_008_000M1_scaffold_1553

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1553_1
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..464)
DNA (462bp) protein (154aa)
Site-specific recombinase, phage integrase family n=2 Tax=Bacteria RepID=A5ZAV9_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM50210.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000M1_scaffold_1553_2
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(546..692)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIP6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO35531.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_1553_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(922..1587)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE50377.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1553_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1769..1975
DNA (207bp) protein (69aa)
DNA binding domain excisionase family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFI9_9FIRM
DNA binding domain excisionase family {ECO:0000313|EMBL:CDE50375.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
L1_008_000M1_scaffold_1553_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2291..2773)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KHK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS45721.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
nimA; 5-nitroimidazole resistance protein NimA
L1_008_000M1_scaffold_1553_6
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2806..3540)
DNA (735bp) protein (245aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JTT4_9FIRM
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EOS37316.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
nicotinamide mononucleotide transporter PnuC
L1_008_000M1_scaffold_1553_7
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3792..4148)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Ruminococcaceae RepID=R7ETS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE06030.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L1_008_000M1_scaffold_1553_8
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4242..4883
DNA (642bp) protein (214aa)
Transcriptional regulator TetR family n=1 Tax=Roseburia sp. CAG:182 RepID=R7QY82_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDF42628.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
TetR family transcriptional regulator
L1_008_000M1_scaffold_1553_9
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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4978..6225
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J3Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28738.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
macrolide transporter
L1_008_000M1_scaffold_1553_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6504..6821
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JMA2_CELLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ82313.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L1_008_000M1_scaffold_1553_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6796..7752
DNA (957bp) protein (319aa)
Aminoglycoside phosphotransferase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MR23_CLOSA
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AGX42943.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L1_008_000M1_scaffold_1553_12
unknown

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7958..8137
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_000M1_scaffold_1553_13
unknown

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8134..8622
DNA (489bp) protein (163aa)

This feature has no annotations

L1_008_000M1_scaffold_1553_14
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8637..9521
DNA (885bp) protein (295aa)
Putative acetyltransferase n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LNR9_9FIRM
Putative acetyltransferase {ECO:0000313|EMBL:CCY74721.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
GCN5-related N-acetyltransferase
L1_008_000M1_scaffold_1553_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9580..10038
DNA (459bp) protein (153aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JRD4_9FIRM
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CBK95653.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_1553_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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10229..10720
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TW32_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48543.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
L1_008_000M1_scaffold_1553_17
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11135..12565
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6T1Q0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC61656.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L1_008_000M1_scaffold_1553_18
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12801..14033)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DRR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91118.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
major facilitator superfamily protein
L1_008_000M1_scaffold_1553_19
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14030..14797)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CS14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI70111.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L1_008_000M1_scaffold_1553_20
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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comp(14772..15572)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HEL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23181.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
Transcriptional regulators of sugar metabolism
L1_008_000M1_scaffold_1553_21
unknown

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15941..16963
DNA (1023bp) protein (341aa)

This feature has no annotations

L1_008_000M1_scaffold_1553_22
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16982..19234
DNA (2253bp) protein (751aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05258.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L1_008_000M1_scaffold_1553_23
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19405..19869
DNA (465bp) protein (155aa)
Transposase-like protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MUG3_9FIRM
Transposase-like protein {ECO:0000313|EMBL:EGS31715.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
transposase IS200-family protein
L1_008_000M1_scaffold_1553_24
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20077..21309
DNA (1233bp) protein (411aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6WHP4_9FIRM
L1_008_000M1_scaffold_1553_25
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21320..22711
DNA (1392bp) protein (464aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DQA3_9FIRM
L1_008_000M1_scaffold_1553_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22692..23633
DNA (942bp) protein (314aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUR1_9FIRM
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000313|EMBL:CDB41608.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L1_008_000M1_scaffold_1553_27
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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23633..24859
DNA (1227bp) protein (409aa)
argJ; Arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.35)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EGG4_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L1_008_000M1_scaffold_1553_28
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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24870..25727
DNA (858bp) protein (286aa)
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=4390514 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. MSTE9 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L1_008_000M1_scaffold_1553_29
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25746..26912
DNA (1167bp) protein (389aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Acetylornithine aminotransferase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DNG2_9FIRM
succinylornithine transaminase
L1_008_000M1_scaffold_1553_30
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26909..27814
DNA (906bp) protein (302aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
argF; Ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Clostridium sp. CAG:678 RepID=R5KLZ6_9CLOT
Displaying items 1-30 of 45 in total

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