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L1_008_000M1_scaffold_1634

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1634_31
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30339..31613
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Clostridiales RepID=D4N137_9FIRM
L1_008_000M1_scaffold_1634_32
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31654..32427
DNA (774bp) protein (258aa)
HAD-superfamily hydrolase, subfamily IIB n=2 Tax=Clostridiales RepID=D4N138_9FIRM
HAD-superfamily hydrolase, subfamily IIB
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDS22958.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1634_33
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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32378..33790
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QBA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY24965.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_1634_34
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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33952..34275
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR family n=2 Tax=Lachnospiraceae RepID=L1QAK8_9FIRM
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:EFV16001.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
transcriptional regulator, PadR family
L1_008_000M1_scaffold_1634_35
unknown

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34272..34931
DNA (660bp) protein (220aa)
Predicted membrane protein n=2 Tax=Clostridiales RepID=D4N140_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL38585.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_36
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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34958..35668
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YXC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32048.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Protein of unknown function (DUF2807).
L1_008_000M1_scaffold_1634_37
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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35701..35886
DNA (186bp) protein (62aa)
PspC domain protein n=2 Tax=Lachnospiraceae RepID=L1QAH9_9FIRM
PspC domain protein {ECO:0000313|EMBL:EKY24969.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Putative stress-responsive transcriptional regulator
L1_008_000M1_scaffold_1634_38
unknown

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36005..37525
DNA (1521bp) protein (507aa)
Sodium/proline symporter n=2 Tax=Clostridiales RepID=D4N142_9FIRM
sodium/proline symporter
Sodium/proline symporter {ECO:0000313|EMBL:CBL38587.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_39
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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37920..38123
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=R5YYK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA31940.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_1634_40
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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38123..38386
DNA (264bp) protein (88aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0NXI4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31939.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_41
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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38388..39002
DNA (615bp) protein (205aa)
Manganese containing catalase n=3 Tax=Lachnospiraceae RepID=E5VM75_9FIRM
CotJC protein {ECO:0000313|EMBL:EKY20623.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Mn-containing catalase
L1_008_000M1_scaffold_1634_42
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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39157..39591
DNA (435bp) protein (145aa)
Transcriptional regulator, MarR family n=3 Tax=Clostridiales RepID=D4N146_9FIRM
transcriptional regulator, MarR family
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDA31937.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_43
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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39593..40369
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5ZCU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA31936.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted permeases
L1_008_000M1_scaffold_1634_44
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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40398..41180
DNA (783bp) protein (261aa)
Uncharacterized protein conserved in bacteria n=4 Tax=Clostridiales RepID=D4N148_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDA31935.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_45
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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41355..43307
DNA (1953bp) protein (651aa)
PRD domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VM71_9FIRM
PRD domain-containing protein {ECO:0000313|EMBL:EFV16059.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Transcriptional antiterminator
L1_008_000M1_scaffold_1634_46
unknown

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43326..43781
DNA (456bp) protein (152aa)
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (EC:2.7.1.69)
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) {ECO:0000313|EMBL:CBL38594.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL38594.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) n=5 Tax=Clostridiales RepID=D4N149_9FIRM
L1_008_000M1_scaffold_1634_47
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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43807..45135
DNA (1329bp) protein (443aa)
Phosphotransferase system, galactitol-specific IIC component n=5 Tax=Clostridiales RepID=D4N150_9FIRM
Phosphotransferase system, galactitol-specific IIC component
PTS system Galactitol-specific IIC component {ECO:0000313|EMBL:CDA31932.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_48
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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45175..45459
DNA (285bp) protein (95aa)
PTS system, Lactose/Cellobiose specific IIB subunit. (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=5 Tax=Clostridiales RepID=D4N151_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY20616.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1634_49
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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45469..45984
DNA (516bp) protein (172aa)
Uncharacterized conserved protein n=5 Tax=Clostridiales RepID=D4N152_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY20615.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1634_50
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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45987..46643
DNA (657bp) protein (219aa)
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Ribulose-phosphate 3-epimerase n=5 Tax=Clostridiales RepID=D4N153_9FIRM
L1_008_000M1_scaffold_1634_51
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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46640..47194
DNA (555bp) protein (185aa)
6-phospho 3-hexuloisomerase n=4 Tax=Clostridiales RepID=E5VM65_9FIRM
Putative 6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:CDA31928.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
sugar phosphate aminotransferase
L1_008_000M1_scaffold_1634_52
unknown

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47406..48767
DNA (1362bp) protein (454aa)
K+ transport systems, NAD-binding component n=2 Tax=Clostridiales RepID=D4N154_9FIRM
K+ transport systems, NAD-binding component
K+ transport systems, NAD-binding component {ECO:0000313|EMBL:CBL38599.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_53
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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48784..50268
DNA (1485bp) protein (495aa)
Trk-type K+ transport systems, membrane components n=3 Tax=Clostridiales RepID=D4N155_9FIRM
Trk-type K+ transport systems, membrane components
Cation transport protein {ECO:0000313|EMBL:EKY20611.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_1634_54
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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50265..50534
DNA (270bp) protein (90aa)
Coenzyme PQQ synthesis protein D (PqqD) n=4 Tax=Clostridiales RepID=D4N156_9FIRM
Coenzyme PQQ synthesis protein D (PqqD).
Uncharacterized protein {ECO:0000313|EMBL:CDA31925.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_55
unknown

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50531..50971
DNA (441bp) protein (147aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0NXJ9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38602.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_56
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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51282..51758
DNA (477bp) protein (159aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
3-isopropylmalate dehydratase small subunit n=5 Tax=Clostridiales RepID=D4N158_9FIRM
L1_008_000M1_scaffold_1634_57
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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51763..53013
DNA (1251bp) protein (417aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridiales RepID=D4N159_9FIRM
L1_008_000M1_scaffold_1634_58
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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53034..53525
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
3-isopropylmalate dehydratase small subunit n=5 Tax=Clostridiales RepID=D4N160_9FIRM
L1_008_000M1_scaffold_1634_59
unknown

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53542..54771
DNA (1230bp) protein (410aa)
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027, ECO:0000313|EMBL:CBL38606.1};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridiales RepID=D4N161_9FIRM
L1_008_000M1_scaffold_1634_60
unknown

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comp(54708..54830)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 31-60 of 62 in total

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