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L1_008_000M1_scaffold_1634

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1634_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1204
DNA (1203bp) protein (401aa)
Retron-type reverse transcriptase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M689_9FIRM
Retron-type reverse transcriptase
Retron-type reverse transcriptase {ECO:0000313|EMBL:CBL26751.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_1634_2
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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1505..2530
DNA (1026bp) protein (342aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=4 Tax=Clostridiales RepID=D4N111_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA31275.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_3
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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2878..3753
DNA (876bp) protein (292aa)
Sugar phosphate isomerases/epimerases (EC:5.3.99.-)
Sugar phosphate isomerases/epimerases n=4 Tax=Clostridiales RepID=D4N113_9FIRM
Xylose isomerase-like TIM barrel protein {ECO:0000313|EMBL:CDA31273.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3857..4618)
DNA (762bp) protein (254aa)
Transcriptional regulators of sugar metabolism n=4 Tax=Clostridiales RepID=D4N118_9FIRM
Transcriptional regulators of sugar metabolism
DeoR family Bacterial regulatory protein {ECO:0000313|EMBL:CDA31268.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_5
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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4762..5790
DNA (1029bp) protein (343aa)
LacI family bacterial regulatory protein n=2 Tax=Anaerostipes RepID=E5VQD0_9FIRM
LacI family bacterial regulatory protein {ECO:0000313|EMBL:CDC38545.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
transcriptional regulator, LacI family
L1_008_000M1_scaffold_1634_6
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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5956..6567
DNA (612bp) protein (204aa)
Cytidylate kinase (EC:2.7.4.14)
Primosomal protein N n=2 Tax=Anaerostipes RepID=E5VQD4_9FIRM
Primosomal protein N {ECO:0000313|EMBL:EFV23912.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
L1_008_000M1_scaffold_1634_7
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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6639..7649
DNA (1011bp) protein (337aa)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; EC=1.1.1.18 {ECO:0000256|HAMAP-Rule:MF_01671};; EC=1.1.1.369 {ECO:0000256|HAMAP-Rule:MF_01671};; Myo-inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01671}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase n=2 Tax=Anaerostipes RepID=E5VQC9_9FIRM
L1_008_000M1_scaffold_1634_8
unknown

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7669..8589
DNA (921bp) protein (307aa)
Sugar phosphate isomerases/epimerases n=4 Tax=Clostridiales RepID=D4N116_9FIRM
Sugar phosphate isomerases/epimerases
Sugar phosphate isomerases/epimerases {ECO:0000313|EMBL:CBL38561.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_9
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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8618..9586
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Anaerostipes RepID=R6QPM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV23905.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
xylose isomerase domain-containing protein
L1_008_000M1_scaffold_1634_10
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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9606..11006
DNA (1401bp) protein (467aa)
Sugar transporter n=2 Tax=Anaerostipes RepID=E5VQC6_9FIRM
Sugar transporter {ECO:0000313|EMBL:CDC38536.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L1_008_000M1_scaffold_1634_11
unknown

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comp(11063..11212)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000M1_scaffold_1634_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11384..12409
DNA (1026bp) protein (342aa)
LacI family Bacterial regulatory protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMA1_9FIRM
LacI family Bacterial regulatory protein {ECO:0000313|EMBL:EFV16016.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L1_008_000M1_scaffold_1634_13
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12745..13767
DNA (1023bp) protein (341aa)
5-dehydro-2-deoxygluconokinase (EC:2.7.1.92)
5-dehydro-2-deoxygluconokinase {ECO:0000256|HAMAP-Rule:MF_01668}; EC=2.7.1.92 {ECO:0000256|HAMAP-Rule:MF_01668};; 2-deoxy-5-keto-D-gluconate kinase {ECO:0000256|HAMAP-Rule:MF_01668}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
5-dehydro-2-deoxygluconokinase n=4 Tax=Clostridiales RepID=D4N121_9FIRM
L1_008_000M1_scaffold_1634_14
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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13794..15722
DNA (1929bp) protein (643aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=4 Tax=Clostridiales RepID=D4N122_9FIRM
Thiamine pyrophosphate enzyme {ECO:0000313|EMBL:EFV16014.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_1634_15
unknown

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15742..16527
DNA (786bp) protein (262aa)
5-deoxyglucuronate isomerase (EC:5.3.1.-)
5-deoxyglucuronate isomerase {ECO:0000313|EMBL:CBL38568.1}; EC=5.3.1.- {ECO:0000313|EMBL:CBL38568.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
5-deoxyglucuronate isomerase n=3 Tax=Clostridiales RepID=D4N123_9FIRM
L1_008_000M1_scaffold_1634_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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16552..17703
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase, class IV n=4 Tax=Clostridiales RepID=D4N124_9FIRM
Alcohol dehydrogenase, class IV
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CDA32035.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17912..18790)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QAJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY24956.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_1634_18
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18991..19599
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NXG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS22946.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L1_008_000M1_scaffold_1634_19
unknown

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19930..20625
DNA (696bp) protein (232aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Deoxyribose-phosphate aldolase n=2 Tax=Clostridiales RepID=D4N127_9FIRM
L1_008_000M1_scaffold_1634_20
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20644..21660
DNA (1017bp) protein (339aa)
Predicted dehydrogenases and related proteins (EC:1.1.1.18)
Predicted dehydrogenases and related proteins n=2 Tax=Clostridiales RepID=D4N128_9FIRM
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EDS22948.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_1634_21
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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21706..22941
DNA (1236bp) protein (412aa)
Transposase, IS116/IS110/IS902 family n=10 Tax=Lachnospiraceae RepID=A5KKV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80251.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_1634_22
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23385..23483
DNA (99bp) protein (33aa)
PTS system mannitol-specific EIICB component {ECO:0000313|EMBL:EDS22949.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS22949.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIC component, Fru family (TC 4.A.2.1.5) n=2 Tax=Clostridiales RepID=D4N129_9FIRM
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIC component, Fru family (TC 4.A.2.1.5)
L1_008_000M1_scaffold_1634_23
unknown

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23443..24675
DNA (1233bp) protein (411aa)
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIC component, Fru family (TC 4.A.2.1.5) n=2 Tax=Clostridiales RepID=D4N129_9FIRM
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIC component, Fru family (TC 4.A.2.1.5)
PTS system D-mannitol-specific IIA component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIB component, Fru family (TC 4.A.2.1.5)/PTS system D-mannitol-specific IIC component, Fru family ... {ECO:0000313|EMBL:CBL38574.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_24
unknown

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24825..25583
DNA (759bp) protein (253aa)
Transcriptional regulator, DeoR family n=2 Tax=Clostridiales RepID=D4N130_9FIRM
transcriptional regulator, DeoR family
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CBL38575.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_25
unknown

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comp(25613..25861)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NXG9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38576.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_26
unknown

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comp(25865..26218)
DNA (354bp) protein (118aa)
Cupin domain n=2 Tax=Clostridiales RepID=D4N132_9FIRM
Cupin domain.
Cupin domain {ECO:0000313|EMBL:CBL38577.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_1634_27
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26430..27719
DNA (1290bp) protein (430aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QAH0_9FIRM
L1_008_000M1_scaffold_1634_28
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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27719..28387
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VM92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16007.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Predicted membrane protein
L1_008_000M1_scaffold_1634_29
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28451..28993)
DNA (543bp) protein (181aa)
Guanosine polyphosphate pyrophosphohydrolases/synthetases (EC:3.1.7.2)
Guanosine polyphosphate pyrophosphohydrolases/synthetases n=3 Tax=Clostridiales RepID=D4N135_9FIRM
Guanosine polyphosphate pyrophosphohydrolases/synthetases {ECO:0000313|EMBL:CDA32041.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_1634_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29228..30334
DNA (1107bp) protein (369aa)
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=2 Tax=Lachnospiraceae RepID=E5VM90_9FIRM
Prephenate dehydrogenase {ECO:0000313|EMBL:EFV16005.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Displaying items 1-30 of 62 in total

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