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L1_008_000M1_scaffold_1664

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1664_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..147
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4K7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98698.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1664_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

162..857
DNA (696bp) protein (232aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=3 Tax=Clostridiales RepID=U2DI66_9FIRM
L1_008_000M1_scaffold_1664_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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903..1454
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y0_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ribosome recycling factor
L1_008_000M1_scaffold_1664_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1521..2228
DNA (708bp) protein (236aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMX3_9FIRM
L1_008_000M1_scaffold_1664_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2232..3026
DNA (795bp) protein (265aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP17_9FIRM
L1_008_000M1_scaffold_1664_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3038..4180
DNA (1143bp) protein (381aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4L1_9FIRM
L1_008_000M1_scaffold_1664_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4182..5468
DNA (1287bp) protein (429aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Membrane-associated zinc metalloprotease n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9Z5_9FIRM
membrane-associated zinc metalloprotease
L1_008_000M1_scaffold_1664_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5596..6420
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98705.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_1664_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6502..7776
DNA (1275bp) protein (425aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMX7_9FIRM
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:CCY98706.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Putative peptidoglycan-binding domain-containing protein
L1_008_000M1_scaffold_1664_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7918..8976
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98707.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1664_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9199..10131
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98708.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted permeases
L1_008_000M1_scaffold_1664_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10217..11485
DNA (1269bp) protein (423aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
M18 family aminopeptidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9Z8_9FIRM
Aspartyl aminopeptidase
L1_008_000M1_scaffold_1664_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11503..12312
DNA (810bp) protein (270aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y8_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CCY98710.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_1664_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12379..13323)
DNA (945bp) protein (315aa)
Predicted permeases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMY0_9FIRM
Predicted permeases {ECO:0000313|EMBL:CCY98711.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted permeases
L1_008_000M1_scaffold_1664_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13473..14513
DNA (1041bp) protein (347aa)
Protein tyrosine/serine phosphatase (EC:3.1.3.48)
Protein tyrosine/serine phosphatase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP27_9FIRM
Protein tyrosine/serine phosphatase {ECO:0000313|EMBL:CCY98712.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1664_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14678..14998
DNA (321bp) protein (107aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4L7_9FIRM
Acetolactate synthase small subunit {ECO:0000313|EMBL:CCY98713.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1664_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15095..16114
DNA (1020bp) protein (340aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NA02_9FIRM
L1_008_000M1_scaffold_1664_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16315..17193)
DNA (879bp) protein (293aa)
Transcriptional regulator LysR family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Z2_9FIRM
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCY98715.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator, LysR family
L1_008_000M1_scaffold_1664_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17672..19396
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98716.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1664_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19409..20002
DNA (594bp) protein (198aa)
Adenylate/guanylate cyclase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP33_9FIRM
Adenylate/guanylate cyclase {ECO:0000313|EMBL:CCY98717.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1664_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19999..20448
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98718.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1664_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20461..22038
DNA (1578bp) protein (526aa)
AAA family ATPase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NA07_9FIRM
AAA family ATPase {ECO:0000313|EMBL:CCY98719.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ATPase AAA
L1_008_000M1_scaffold_1664_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22051..22554
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Z6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98720.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_1664_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22676..23293
DNA (618bp) protein (206aa)
VanZ-like protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMY7_9FIRM
VanZ-like protein {ECO:0000313|EMBL:CCY98721.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
VanZ-like protein
L1_008_000M1_scaffold_1664_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23698..25353
DNA (1656bp) protein (552aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NP38_9FIRM
L1_008_000M1_scaffold_1664_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25463..27409
DNA (1947bp) protein (649aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4M7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY98723.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted membrane protein
L1_008_000M1_scaffold_1664_27
unknown

Not on your lists

27542..27769
DNA (228bp) protein (76aa)

This feature has no annotations

L1_008_000M1_scaffold_1664_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27881..28717
DNA (837bp) protein (279aa)
Cell Wall Hydrolase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NA09_9FIRM
Cell Wall Hydrolase {ECO:0000313|EMBL:CCY98724.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Cell Wall Hydrolase.
L1_008_000M1_scaffold_1664_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28897..30387
DNA (1491bp) protein (497aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N401_9FIRM
Threonine synthase {ECO:0000313|EMBL:CCY98725.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_1664_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30698..31756
DNA (1059bp) protein (353aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMZ2_9FIRM
Displaying items 1-30 of 40 in total

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