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L1_008_000M1_scaffold_1681

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1681_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FPE4_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG95517.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Helix-turn-helix.
L1_008_000M1_scaffold_1681_2
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(313..570)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73520.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L1_008_000M1_scaffold_1681_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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896..1456
DNA (561bp) protein (187aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LR84_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFR38778.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
phage integrase site specific recombinase
L1_008_000M1_scaffold_1681_4
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1974..3656)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K5N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS41673.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
AIPR protein.
L1_008_000M1_scaffold_1681_5
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3955..5328)
DNA (1374bp) protein (458aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Eubacterium sp. CAG:161 RepID=R5LAC7_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCY70201.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L1_008_000M1_scaffold_1681_6
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5431..5742)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51935.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000M1_scaffold_1681_7
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5752..8085)
DNA (2334bp) protein (778aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G3_9FIRM
L1_008_000M1_scaffold_1681_8
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8181..8285)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51937.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_1681_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8387..8986
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51938.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Domain of unknown function (DUF1836).
L1_008_000M1_scaffold_1681_10
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9332..9997)
DNA (666bp) protein (222aa)
Bacterial group 2 Ig-like protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G6_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EDM51939.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Bacterial surface proteins containing Ig-like domains
L1_008_000M1_scaffold_1681_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10006..11211)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51940.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_1681_12
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11343..11639)
DNA (297bp) protein (99aa)
TrpR family protein YerC/YecD n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G8_9FIRM
TrpR family protein YerC/YecD {ECO:0000313|EMBL:EDM51941.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
TrpR-related protein YerC/YecD
L1_008_000M1_scaffold_1681_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11702..12574)
DNA (873bp) protein (291aa)
33 kDa chaperonin n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5G9_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Disulfide bond chaperones of the HSP33 family
L1_008_000M1_scaffold_1681_14
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12617..13375)
DNA (759bp) protein (253aa)
Methyltransferase type 11 n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YQA9_9FIRM
Methyltransferase type 11 {ECO:0000313|EMBL:CDA29623.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
Methyltransferase domain.
L1_008_000M1_scaffold_1681_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13544..14515
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51945.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_1681_16
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14556..15065)
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z5H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51946.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
preprotein translocase subunit SecA
L1_008_000M1_scaffold_1681_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15256..15462
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51947.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_1681_18
unknown

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comp(15511..15660)
DNA (150bp) protein (50aa)

This feature has no annotations

L1_008_000M1_scaffold_1681_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16053..17327)
DNA (1275bp) protein (425aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z343_9FIRM
L1_008_000M1_scaffold_1681_20
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17626..18480
DNA (855bp) protein (285aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Oxidoreductase NAD-binding domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z342_9FIRM
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:EDM52626.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_1681_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18480..19865
DNA (1386bp) protein (462aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EDM52625.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EDM52625.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.97.-.- 1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z341_9FIRM
L1_008_000M1_scaffold_1681_22
unknown

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19969..20121
DNA (153bp) protein (51aa)

This feature has no annotations

L1_008_000M1_scaffold_1681_23
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20543..20683)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z340_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52624.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_1681_24
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21058..21441
DNA (384bp) protein (128aa)
Transcriptional regulator, Fur family n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z339_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDM52623.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_000M1_scaffold_1681_25
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21504..22049
DNA (546bp) protein (182aa)
Rubredoxin n=2 Tax=root RepID=A5Z338_9FIRM
Rubredoxin {ECO:0000313|EMBL:EDM52622.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ferredoxin hydrogenase
L1_008_000M1_scaffold_1681_26
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22736..23686)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z376_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52590.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000M1_scaffold_1681_27
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24003..26144)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z375_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52589.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000M1_scaffold_1681_28
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26215..27390)
DNA (1176bp) protein (392aa)
Putative cysteine desulfurase family protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z374_9FIRM
Putative cysteine desulfurase family protein {ECO:0000313|EMBL:EDM52588.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Selenocysteine lyase
L1_008_000M1_scaffold_1681_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27508..31119)
DNA (3612bp) protein (1204aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z373_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52587.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000M1_scaffold_1681_30
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31249..32109)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=root RepID=A5Z372_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM52586.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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