ggKbase home page

L1_008_000M1_scaffold_1928

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1928_1
unknown

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)

This feature has no annotations

L1_008_000M1_scaffold_1928_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(435..1688)
DNA (1254bp) protein (418aa)
Trk system potassium uptake protein TrkH n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MPD6_9FIRM
Trk system potassium uptake protein TrkH {ECO:0000313|EMBL:CCY91514.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Trk-type K+ transport systems, membrane components
L1_008_000M1_scaffold_1928_3
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1704..3068)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NQB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ04354.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
hypothetical protein
L1_008_000M1_scaffold_1928_4
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3334..3834)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8WDL2_STRFA
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADW02357.1}; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATCC 33331 / IAF-45CD).;"
L1_008_000M1_scaffold_1928_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(3875..4924)
DNA (1050bp) protein (350aa)
Uncharacterized protein id=4236697 bin=GWF2_Clostridiales_38_85 species=Desulfitobacterium dehalogenans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
L1_008_000M1_scaffold_1928_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4924..5205)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN34498.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000M1_scaffold_1928_7
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(5266..6171)
DNA (906bp) protein (302aa)
Helix-turn-helix type 11 domain protein id=4236710 bin=GWF2_Clostridiales_38_85 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
helix-turn-helix type 11 domain-containing protein
Tax=GWF2_Clostridiales_38_85_curated
L1_008_000M1_scaffold_1928_8
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

6393..7685
DNA (1293bp) protein (431aa)
MATE efflux family protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PT21_9FUSO
MATE efflux family protein {ECO:0000313|EMBL:EHO81533.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_1928_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

7738..8349
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26283.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_1928_10
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8457..9626
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WB26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92971.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
L1_008_000M1_scaffold_1928_11
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9640..10317
DNA (678bp) protein (226aa)
Similarity (Modular protein) n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WKI4_9FIRM
Similarity (Modular protein) {ECO:0000313|EMBL:CCZ92972.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L1_008_000M1_scaffold_1928_12
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10320..11711
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VQA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92973.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
UBA/THIF-type NAD/FAD binding protein
L1_008_000M1_scaffold_1928_13
unknown

Not on your lists

11708..11923
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_000M1_scaffold_1928_14
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11938..12207
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VR70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92975.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
L1_008_000M1_scaffold_1928_15
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12209..12979
DNA (771bp) protein (257aa)
RHS repeat-associated core domain protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WB32_9FIRM
RHS repeat-associated core domain protein {ECO:0000313|EMBL:CCZ92976.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
RHS repeat-associated core domain-containing protein
L1_008_000M1_scaffold_1928_16
unknown

Not on your lists

12990..13532
DNA (543bp) protein (181aa)

This feature has no annotations

L1_008_000M1_scaffold_1928_17
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13529..14599
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VQB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ92978.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Transglutaminase-like enzyme, putative cysteine protease
L1_008_000M1_scaffold_1928_18
Bacillus amyloliquefaciens, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14684..15151)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI0003693C93
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJD56677.1}; TaxID=1390 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus amyloliquefaciens (Bacillus velezensis).;"
L1_008_000M1_scaffold_1928_19
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15786..16628
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG6O-1 RepID=J8ZGU4_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJV49167.1}; TaxID=1053192 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG6O-1.;"
hypothetical protein
L1_008_000M1_scaffold_1928_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16703..18154)
DNA (1452bp) protein (484aa)
Site-specific recombinase XerD n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN68_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBL35201.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_1928_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18117..18293)
DNA (177bp) protein (59aa)
Site-specific recombinase XerD n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUW2_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK96881.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Displaying 21 items

View Taxonomy