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L1_008_000M1_scaffold_2107

Search features with annotation key words

Displaying items 31-60 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2107_31
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37078..38040)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75855.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Exopolyphosphatase-related proteins
L1_008_000M1_scaffold_2107_32
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38055..38450)
DNA (396bp) protein (132aa)
Ribosome-binding factor A n=2 Tax=Ruminococcus RepID=C6JGH6_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosome-binding factor A
L1_008_000M1_scaffold_2107_33
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38619..41459)
DNA (2841bp) protein (947aa)
Translation initiation factor IF-2 n=2 Tax=Ruminococcus RepID=C6JGH7_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
bacterial translation initiation factor 2 (bIF-2)
L1_008_000M1_scaffold_2107_34
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41463..41762)
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75858.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L1_008_000M1_scaffold_2107_35
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41752..42027)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75859.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L1_008_000M1_scaffold_2107_36
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42011..43231)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNI9_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcription termination factor NusA
L1_008_000M1_scaffold_2107_37
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43256..43720)
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=2 Tax=Ruminococcus RepID=C6JGI1_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_2107_38
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(43872..46118)
DNA (2247bp) protein (749aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPE8_9FIRM
L1_008_000M1_scaffold_2107_39
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46191..46697)
DNA (507bp) protein (169aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79793.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_008_000M1_scaffold_2107_40
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46900..48048)
DNA (1149bp) protein (383aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase, B subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI3_9FIRM
DNA gyrase, B subunit {ECO:0000313|EMBL:EES75863.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_008_000M1_scaffold_2107_41
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48512..48859
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N6P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97539.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_2107_42
Eggerthia catenaformis, Eggerthia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(49301..50077)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2Q2R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMD16531.1}; TaxID=999415 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Eggerthia.;" source="Eggerthia catenaformis OT 569 = DSM 20559.;"
Ig domain-containing protein
L1_008_000M1_scaffold_2107_43
unknown

Not on your lists

comp(50405..50506)
DNA (102bp) protein (34aa)

This feature has no annotations

L1_008_000M1_scaffold_2107_44
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50683..51144)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75866.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Abortive infection bacteriophage resistance protein
L1_008_000M1_scaffold_2107_45
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51410..51733)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75867.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_2107_46
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51981..55742)
DNA (3762bp) protein (1254aa)
Outer membrane protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J9Q1_9FIRM
Outer membrane protein {ECO:0000313|EMBL:EES78194.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Ig-like domain-containing surface protein
L1_008_000M1_scaffold_2107_47
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55762..56016)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75870.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_2107_48
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56170..56793)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F8D72A
Uncharacterized protein {ECO:0000313|EMBL:EQM98785.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L1_008_000M1_scaffold_2107_49
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56790..57416)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CKB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78400.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_2107_50
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57400..57768)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78399.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L1_008_000M1_scaffold_2107_51
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57755..58321)
DNA (567bp) protein (189aa)
RNA polymerase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003631711
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EQM98866.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_2107_52
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58809..60977)
DNA (2169bp) protein (723aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=2 Tax=Ruminococcus RepID=C6JGJ5_9FIRM
L1_008_000M1_scaffold_2107_53
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60992..62530)
DNA (1539bp) protein (513aa)
Exopolyphosphatase (EC:3.6.1.11)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75876.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L1_008_000M1_scaffold_2107_54
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(62567..63874)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75877.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted ATPase (AAA+ superfamily)
L1_008_000M1_scaffold_2107_55
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64060..65190)
DNA (1131bp) protein (377aa)
Prephenate dehydratase (EC:4.2.1.51)
Chorismate mutase n=2 Tax=Ruminococcus RepID=C6JGJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78373.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_008_000M1_scaffold_2107_56
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65212..66495)
DNA (1284bp) protein (428aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CK29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78371.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L1_008_000M1_scaffold_2107_57
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

66661..67047
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78369.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1113).
L1_008_000M1_scaffold_2107_58
unknown

Not on your lists

67126..67245
DNA (120bp) protein (40aa)

This feature has no annotations

L1_008_000M1_scaffold_2107_59
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67242..67988
DNA (747bp) protein (249aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGK1_9FIRM
L1_008_000M1_scaffold_2107_60
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

67982..68419
DNA (438bp) protein (146aa)
Aspartate carbamoyltransferase, regulatory subunit n=2 Tax=Ruminococcus RepID=C6JGK2_9FIRM
Aspartate carbamoyltransferase, regulatory subunit {ECO:0000313|EMBL:EES75882.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Aspartate carbamoyltransferase, regulatory subunit
Displaying items 31-60 of 89 in total

View Taxonomy