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L1_008_000M1_scaffold_2176

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2176_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..180)
DNA (180bp) protein (60aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GXX4_9FIRM
Deoxyxylulose-5-phosphate synthase
L1_008_000M1_scaffold_2176_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..1090)
DNA (888bp) protein (296aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N472_9FIRM
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:CCY96729.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_2176_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1080..1304)
DNA (225bp) protein (75aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Exonuclease VII small subunit. (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ30_9FIRM
L1_008_000M1_scaffold_2176_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1304..2509)
DNA (1206bp) protein (402aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHZ7_9FIRM
L1_008_000M1_scaffold_2176_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2506..2982)
DNA (477bp) protein (159aa)
N utilization substance protein B homolog n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHA1_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcription antitermination factor NusB
L1_008_000M1_scaffold_2176_6
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3015..3401)
DNA (387bp) protein (129aa)
Uncharacterized protein conserved in bacteria n=3 Tax=Ruminococcus RepID=D4LPQ2_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL18553.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L1_008_000M1_scaffold_2176_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3482..5071)
DNA (1590bp) protein (530aa)
Peptide chain release factor 3 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N467_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
peptide chain release factor 3
L1_008_000M1_scaffold_2176_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5159..6004)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96723.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_2176_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6016..6330)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96722.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_2176_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6296..6868)
DNA (573bp) protein (191aa)
Stage III sporulation protein AF (Spore_III_AF) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH97_9FIRM
Stage III sporulation protein AF (Spore_III_AF) {ECO:0000313|EMBL:CCY96721.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Stage III sporulation protein AF (Spore_III_AF).
L1_008_000M1_scaffold_2176_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6871..8160)
DNA (1290bp) protein (430aa)
Stage III sporulation protein AE (Spore_III_AE) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MY87_9FIRM
Stage III sporulation protein AE (Spore_III_AE) {ECO:0000313|EMBL:CCY96720.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Stage III sporulation protein AE (spore_III_AE).
L1_008_000M1_scaffold_2176_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8157..8543)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N463_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96719.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Stage III sporulation protein AC/AD protein family.
L1_008_000M1_scaffold_2176_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8558..8752)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96718.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
stage III sporulation protein AC
L1_008_000M1_scaffold_2176_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8811..9329)
DNA (519bp) protein (173aa)
Stage III sporulation protein AB (Spore_III_AB) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHY8_9FIRM
Stage III sporulation protein AB (Spore_III_AB) {ECO:0000313|EMBL:CCY96717.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Stage III sporulation protein AB (spore_III_AB).
L1_008_000M1_scaffold_2176_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9314..10246)
DNA (933bp) protein (311aa)
Stage III sporulation protein AA n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH94_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:CCY96716.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
stage III sporulation protein AA
L1_008_000M1_scaffold_2176_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10331..11479)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MY83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96715.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_2176_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11505..12053)
DNA (549bp) protein (183aa)
Phosphopantetheinyl transferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N458_9FIRM
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CCY96714.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Phosphopantetheinyl transferase
L1_008_000M1_scaffold_2176_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12050..13936)
DNA (1887bp) protein (629aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ17_9FIRM
L1_008_000M1_scaffold_2176_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13899..15353)
DNA (1455bp) protein (485aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHY3_9FIRM
L1_008_000M1_scaffold_2176_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15512..15745)
DNA (234bp) protein (78aa)
Acyl carrier protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH90_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
acyl carrier protein
L1_008_000M1_scaffold_2176_21
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15882..17132)
DNA (1251bp) protein (417aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Blautia sp. KLE 1732 RepID=U2D9Q5_9FIRM
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:ERI93535.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Bacterial cell division membrane protein
L1_008_000M1_scaffold_2176_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17599..18156)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N454_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
translation elongation factor P (EF-P)
L1_008_000M1_scaffold_2176_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18243..18752)
DNA (510bp) protein (170aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ12_9FIRM
L1_008_000M1_scaffold_2176_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18749..19255)
DNA (507bp) protein (169aa)
HAD superfamily (Subfamily IIIA) phosphatase TIGR01668 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHX8_9FIRM
HAD superfamily (Subfamily IIIA) phosphatase TIGR01668 {ECO:0000313|EMBL:CCY96707.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L1_008_000M1_scaffold_2176_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19266..20132)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH87_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96706.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L1_008_000M1_scaffold_2176_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20148..21494)
DNA (1347bp) protein (449aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MY74_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_2176_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21690..22907)
DNA (1218bp) protein (406aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.-)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N450_9FIRM
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CCY96704.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_2176_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23130..24464
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase/leucine dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZ07_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L1_008_000M1_scaffold_2176_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24655..25053)
DNA (399bp) protein (133aa)
Transcriptional repressor NrdR n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHX6_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator NrdR
L1_008_000M1_scaffold_2176_30

Not on your lists

25193..25447
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZEE5_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61699.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sporulation protein, YlmC/YmxH family
Displaying items 1-30 of 40 in total

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