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L1_008_000M1_scaffold_2178

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2178_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..157
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1R7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22167.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_2178_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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172..519
DNA (348bp) protein (116aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZEI4_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFQ08418.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Phage integrase family.
L1_008_000M1_scaffold_2178_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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693..1517
DNA (825bp) protein (275aa)
Site-specific recombinase, phage integrase family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S9Q2_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDP22077.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Phage integrase family.
L1_008_000M1_scaffold_2178_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1658..2584)
DNA (927bp) protein (309aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEU98279.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEU98279.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1R9_9FIRM
L1_008_000M1_scaffold_2178_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2587..3270)
DNA (684bp) protein (228aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EEU98280.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEU98280.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S0_9FIRM
L1_008_000M1_scaffold_2178_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3426..4721
DNA (1296bp) protein (432aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Trigger factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S1_9FIRM
trigger factor
L1_008_000M1_scaffold_2178_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4792..5571)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98282.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted permeases
L1_008_000M1_scaffold_2178_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5573..6016)
DNA (444bp) protein (148aa)
Transcriptional regulator, MarR family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S3_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEU98283.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, MarR family
L1_008_000M1_scaffold_2178_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6197..8539)
DNA (2343bp) protein (781aa)
Ferrous iron transport protein B n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S4_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EEU98284.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
ferrous iron transporter FeoB
L1_008_000M1_scaffold_2178_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8756..9781)
DNA (1026bp) protein (342aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEU98286.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EEU98286.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S6_9FIRM
L1_008_000M1_scaffold_2178_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10041..11114)
DNA (1074bp) protein (358aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Galactose mutarotase and related enzymes (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S8_9FIRM
L1_008_000M1_scaffold_2178_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11333..11893)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98289.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_008_000M1_scaffold_2178_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12117..12932)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98290.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_2178_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13062..16988)
DNA (3927bp) protein (1309aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T1_9FIRM
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EEU98292.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Cation/multidrug efflux pump
L1_008_000M1_scaffold_2178_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17461..18399
DNA (939bp) protein (313aa)
PSP1 C-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T4_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EEU98294.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Uncharacterized homolog of PSP1
L1_008_000M1_scaffold_2178_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18995..19669
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98297.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted O-methyltransferase
L1_008_000M1_scaffold_2178_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19740..20579
DNA (840bp) protein (280aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T8_9FIRM
conserved hypothetical protein TIGR00096
L1_008_000M1_scaffold_2178_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20831..21319
DNA (489bp) protein (163aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Putative metallophosphoesterase (EC:3.1.4.-)
Phosphodiesterase family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1T9_9FIRM
L1_008_000M1_scaffold_2178_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21316..22083
DNA (768bp) protein (256aa)
Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000313|EMBL:EEU98300.1}; EC=6.3.4.15 {ECO:0000313|EMBL:EEU98300.1};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U0_9FIRM
L1_008_000M1_scaffold_2178_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22355..22891)
DNA (537bp) protein (179aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U1_9FIRM
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEU98301.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L1_008_000M1_scaffold_2178_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22997..24286
DNA (1290bp) protein (430aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U2_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EEU98302.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L1_008_000M1_scaffold_2178_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24452..25417)
DNA (966bp) protein (322aa)
DNA polymerase III, delta' subunit family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U3_9FIRM
DNA polymerase III, delta' subunit family protein {ECO:0000313|EMBL:EEU98303.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_2178_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25414..26052)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98304.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Rhomboid family.
L1_008_000M1_scaffold_2178_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26739..28310)
DNA (1572bp) protein (524aa)
Magnesium transporter n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U7_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Mg2+ transporter (mgtE)
L1_008_000M1_scaffold_2178_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28923..29282
DNA (360bp) protein (120aa)
Toxin-antitoxin system, toxin component, RelE family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1U9_9FIRM
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EEU98309.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L1_008_000M1_scaffold_2178_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29279..29566
DNA (288bp) protein (96aa)
DNA-binding helix-turn-helix protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V0_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEU98310.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator, XRE family
L1_008_000M1_scaffold_2178_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30017..30577)
DNA (561bp) protein (187aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H1V2_9FIRM
Displaying 27 items

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